| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625692
Identifier: 84625692
GI number: 84625692
Start: 4549533
End: 4550114
Strand: Reverse
Name: 84625692
Synonym: XOO_4035
Alternate gene names: NA
Gene position: 4550114-4549533 (Counterclockwise)
Preceding gene: 84625693
Following gene: 84625691
Centisome position: 92.1
GC content: 65.46
Gene sequence:
>582_bases ATGATGATGCCTGTTCGCGCCCGTTGGCGCGCCTTGCCGCGCGCATTACCTTGGCCGCTATTGGCGCTGATCACGCTGTA CGCGGGCTATGTGCTGTTGGGCAATCTGCTGCTCAACACACCGCTCGGCCCGGCCGCGCTGAATCGCTCGCCCGATAAAT TCGCCATGCAATCGGGCCCGGGGCTGACCTGGTGGCCCGGGCGTCTGGTGCTGTGGAATGTCGATCTGCAAGGCCAGTCC ACGCGTACGAACTGGAAGGTGAGTGCGCAGAGGATGAGCGGGCGGATTCGGTTACTCCCATTGCTGCACTGCCAACTGCT GGTGCCGGAACTGCATGCGCGTGGCGTGCATGGCGGCATGCGGGCCGCGGTCGTCGCAGCGACGCAATCGCCTGCGGCGA CGCAAGCGAGGCGTGCTGCGGTTGCTCCGGTGAAGGATGCCGCTGATATGCCGGCCGCTTCAGCAAGCGAGGGGACGGCG ACAGCAACGCGCAATGTCGAAAAAACGGCGACGCAGCCGCCCGCGCAGCATCCGCGCGCAACGACTGCAACGAACGCGAC GCCCACAGCGAGTACGTCGTAA
Upstream 100 bases:
>100_bases CAAGTGATGCAGGCGCTGGCGTGATCGTACTGCGTCCTGCTCACGGTGGGCTTGGCACACTGTGCCGAGCCGCGTGCGCG GTTTTCAGGAGCTTGCCGTG
Downstream 100 bases:
>100_bases TCAGCCCGGTGCGCCGACGCTCACGCCAGCACACCACTACCGCCAACCGCCTGGACCCTGCAGTTCGACCGCATCGTTGC CGATCACCTGCAGGCCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MMMPVRARWRALPRALPWPLLALITLYAGYVLLGNLLLNTPLGPAALNRSPDKFAMQSGPGLTWWPGRLVLWNVDLQGQS TRTNWKVSAQRMSGRIRLLPLLHCQLLVPELHARGVHGGMRAAVVAATQSPAATQARRAAVAPVKDAADMPAASASEGTA TATRNVEKTATQPPAQHPRATTATNATPTASTS
Sequences:
>Translated_193_residues MMMPVRARWRALPRALPWPLLALITLYAGYVLLGNLLLNTPLGPAALNRSPDKFAMQSGPGLTWWPGRLVLWNVDLQGQS TRTNWKVSAQRMSGRIRLLPLLHCQLLVPELHARGVHGGMRAAVVAATQSPAATQARRAAVAPVKDAADMPAASASEGTA TATRNVEKTATQPPAQHPRATTATNATPTASTS >Mature_193_residues MMMPVRARWRALPRALPWPLLALITLYAGYVLLGNLLLNTPLGPAALNRSPDKFAMQSGPGLTWWPGRLVLWNVDLQGQS TRTNWKVSAQRMSGRIRLLPLLHCQLLVPELHARGVHGGMRAAVVAATQSPAATQARRAAVAPVKDAADMPAASASEGTA TATRNVEKTATQPPAQHPRATTATNATPTASTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20591; Mature: 20591
Theoretical pI: Translated: 12.18; Mature: 12.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMPVRARWRALPRALPWPLLALITLYAGYVLLGNLLLNTPLGPAALNRSPDKFAMQSGP CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCCC GLTWWPGRLVLWNVDLQGQSTRTNWKVSAQRMSGRIRLLPLLHCQLLVPELHARGVHGGM CCEEECCEEEEEEECCCCCCCCCCEEEEHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCC RAAVVAATQSPAATQARRAAVAPVKDAADMPAASASEGTATATRNVEKTATQPPAQHPRA EEEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCC TTATNATPTASTS CCCCCCCCCCCCC >Mature Secondary Structure MMMPVRARWRALPRALPWPLLALITLYAGYVLLGNLLLNTPLGPAALNRSPDKFAMQSGP CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCCC GLTWWPGRLVLWNVDLQGQSTRTNWKVSAQRMSGRIRLLPLLHCQLLVPELHARGVHGGM CCEEECCEEEEEEECCCCCCCCCCEEEEHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCC RAAVVAATQSPAATQARRAAVAPVKDAADMPAASASEGTATATRNVEKTATQPPAQHPRA EEEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCC TTATNATPTASTS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA