| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625691
Identifier: 84625691
GI number: 84625691
Start: 4548612
End: 4549235
Strand: Reverse
Name: 84625691
Synonym: XOO_4034
Alternate gene names: NA
Gene position: 4549235-4548612 (Counterclockwise)
Preceding gene: 84625692
Following gene: 84625688
Centisome position: 92.09
GC content: 63.62
Gene sequence:
>624_bases GTGCGCGGGCTGGCGGTATTACAGCTAACCGATGCGCTGATTGCCTTGCATGGCGACACCGCAGCGTTGGATGTCACCCG CAATGCGCAGGGCCGGCATGCGGTCGCAACGCGTGCCGGCCAGGGGCGTGCAGATGGCGAGCTGCGTTGGATACGCGGTG CATTGCAGCCCGGCAGCCAACTGCACTGGCGCGTGCCGCTGCACGACAGTACGCGCACACCGGCCACATTGCTGGGCGAA CTGACCGCGCAGTTGCAGGTCGATCAGAACATGCGTGTACAGGTGAGCATGCCCGAACCGGCCGATGCCGGGCTGACGCT GGATGCCGACCTGCGCGTGCAAGGCCGGCAACTGCCATTGCACTCCATGCGCAGTCTGTGGGCGCGCATCGTGCTGGACG ACACGCGCATGCAATGGCGTCAGCCGGTCGGTGTGGATGGACGTGTGCGCATCCAGATGCGCGACCTGGCATTTTTGATG GCGTTGTATACACGCGACCGTTCGATTCCGAACTGGATGCTGCAATTGGTAGATGCCGGCCAGGCGCAAGTGACCGCACG CGTGCATTGGCAAGGCGAAACGGTCATCGTCGACCGGTTGCAGGCACGTAACCAACGCTTTTAG
Upstream 100 bases:
>100_bases AGTGTTCGAATCGGCGCGTGTGCGCTGGGGCGAACACGAAGTGATGCGCAATGGGCAAGTACGTGTCGAAGCCAGCATCG CGCGGCATTAGCCAGACCAG
Downstream 100 bases:
>100_bases GTCGATGCGCGCCTGCGTTTGCAGGGCCATCGACGCAGCGGCAGCCTGCCGGCCCGCTGGGGACTGCTGAGTGCAGCGGT GTGCCTGCGCGGCGATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRGLAVLQLTDALIALHGDTAALDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQLHWRVPLHDSTRTPATLLGE LTAQLQVDQNMRVQVSMPEPADAGLTLDADLRVQGRQLPLHSMRSLWARIVLDDTRMQWRQPVGVDGRVRIQMRDLAFLM ALYTRDRSIPNWMLQLVDAGQAQVTARVHWQGETVIVDRLQARNQRF
Sequences:
>Translated_207_residues MRGLAVLQLTDALIALHGDTAALDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQLHWRVPLHDSTRTPATLLGE LTAQLQVDQNMRVQVSMPEPADAGLTLDADLRVQGRQLPLHSMRSLWARIVLDDTRMQWRQPVGVDGRVRIQMRDLAFLM ALYTRDRSIPNWMLQLVDAGQAQVTARVHWQGETVIVDRLQARNQRF >Mature_207_residues MRGLAVLQLTDALIALHGDTAALDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQLHWRVPLHDSTRTPATLLGE LTAQLQVDQNMRVQVSMPEPADAGLTLDADLRVQGRQLPLHSMRSLWARIVLDDTRMQWRQPVGVDGRVRIQMRDLAFLM ALYTRDRSIPNWMLQLVDAGQAQVTARVHWQGETVIVDRLQARNQRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23271; Mature: 23271
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLAVLQLTDALIALHGDTAALDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQ CCCEEEEEECCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC LHWRVPLHDSTRTPATLLGELTAQLQVDQNMRVQVSMPEPADAGLTLDADLRVQGRQLPL EEEEECCCCCCCCHHHHHHHHHHEEEECCCCEEEEECCCCCCCCEEEECCCEECCCCCCH HSMRSLWARIVLDDTRMQWRQPVGVDGRVRIQMRDLAFLMALYTRDRSIPNWMLQLVDAG HHHHHHHHHEEECCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCC QAQVTARVHWQGETVIVDRLQARNQRF CEEEEEEEEECCCEEEEEEHHHCCCCC >Mature Secondary Structure MRGLAVLQLTDALIALHGDTAALDVTRNAQGRHAVATRAGQGRADGELRWIRGALQPGSQ CCCEEEEEECCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC LHWRVPLHDSTRTPATLLGELTAQLQVDQNMRVQVSMPEPADAGLTLDADLRVQGRQLPL EEEEECCCCCCCCHHHHHHHHHHEEEECCCCEEEEECCCCCCCCEEEECCCEECCCCCCH HSMRSLWARIVLDDTRMQWRQPVGVDGRVRIQMRDLAFLMALYTRDRSIPNWMLQLVDAG HHHHHHHHHEEECCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCC QAQVTARVHWQGETVIVDRLQARNQRF CEEEEEEEEECCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA