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The map label for this gene is 84625618

Identifier: 84625618

GI number: 84625618

Start: 4466699

End: 4467148

Strand: Reverse

Name: 84625618

Synonym: XOO_3961

Alternate gene names: NA

Gene position: 4467148-4466699 (Counterclockwise)

Preceding gene: 84625619

Following gene: 84625617

Centisome position: 90.42

GC content: 58.22

Gene sequence:

>450_bases
ATGTCACCATGTTCACCGCTGAAAGTGCGTGCTAATCAGGAGAAGGTATCGGGGATCAAGCGCCACATCGCGGTGGATAC
GCAAGGCTTTCCACATGCCGTTGCGGTGACCACGGCGGAAGTCACCGATCGTCAAGGTGCGCTGGAGGCATTGAAACGCT
GCCGATCGGGTTTAGGTCGGGTGAAACGCCTGCTGTGCGACAGCGGCTACACCGGAGATCCCTTCGCCGAGGGCGTACAG
GACATTCTGGGCAAGCATGTCACCGTACAGATTGCCAAGCGCAGCGAGCTGCATACCTTCAAGGTCATGCCCAAGCGCTG
GAGTGTCGAACGCAGCTTTGCCTGGCTGGAGAAGAACCGGAGGCTATGGAAGAACTGCGAGCGAAGGCCCAATACCAGCT
TGCAGTTCATCCATCTGGCGTTCCTGGCACTGCTGCTCAGGAGATCGTGA

Upstream 100 bases:

>100_bases
ATGTGGCGGTTCAACCGCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTG
GTCCGAGCGGGCCCTGCGTG

Downstream 100 bases:

>100_bases
ACAGGCTCTAAGGAACCTTTGAACAACGCTTTCGCCAGCTTCCGATGAGTACCTGGGGCAGTCTCCGTAAGTGGCAAGCC
ATTGATTTCCAGCATGTGTG

Product: ISXo3 transposase orfB

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Isxo3 Transposase Protein; ISXo3 Transposase ORF B; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase-Like Protein; Transposase Is4 Family; IS Transposase; Transposase IS5 Family; Transposase Of; Transposase Fragment; Transposase Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSPCSPLKVRANQEKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQ
DILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRPNTSLQFIHLAFLALLLRRS

Sequences:

>Translated_149_residues
MSPCSPLKVRANQEKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQ
DILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRPNTSLQFIHLAFLALLLRRS
>Mature_148_residues
SPCSPLKVRANQEKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQD
ILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRPNTSLQFIHLAFLALLLRRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16921; Mature: 16790

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPCSPLKVRANQEKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGR
CCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHH
VKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNR
HHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHEEECCCHHCHHHHHHHHHHHH
RLWKNCERRPNTSLQFIHLAFLALLLRRS
HHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPCSPLKVRANQEKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGR
CCCCCCEECCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHH
VKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNR
HHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHEEECCCHHCHHHHHHHHHHHH
RLWKNCERRPNTSLQFIHLAFLALLLRRS
HHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA