| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625591
Identifier: 84625591
GI number: 84625591
Start: 4432829
End: 4433545
Strand: Reverse
Name: 84625591
Synonym: XOO_3934
Alternate gene names: NA
Gene position: 4433545-4432829 (Counterclockwise)
Preceding gene: 84625592
Following gene: 84625589
Centisome position: 89.74
GC content: 65.97
Gene sequence:
>717_bases ATGACTGAGTCGTATCCCGCACCGCGCGAAGACGCACCGCTGGTGGTGTTCGACTTCGACCACACCCTGTACGACGGCGA TTCCGGCAGTCATCTGTTCGCCTGGCTGATCAAGCGCAATCCGTTGCGCTTGCTGGTCGCACTGTTGGCCTCGCCCATTC TCGGACCGATGGCGGCGATGCTGCCCACCCGGCGGCGCGGCGTGTCCGGCTATGTGTGGATCGCCACCTTCGGCCTGCAC CGCGCGCGCGAGTTCAACCGTTTCATCGACGCATACGTGCTCAAGCATGAAGCGCAGATCCGCCAGCGCCTGCTCCCGCA TGCGCTGAAGGTCTTCACCGAGCACCGTGCCGCCGGCGACCGTGTGGTGGTCGCCACCGGTGCACCGCCGGAATTGGCGC GTGCGATTCTCGGATTCGTTGCGCACCAGGACGTGCCGGTGATCGGCAGCCTGGTCGGCCCACGCCTGGGCGCAGTCACG GCGCGGCGTCACTGCCATAACGAAGAAAAGATGCGCATGTTGCGCGAGCGCGGCTATGCCGATATCGCCATCGCCTACTC GGACAGCACTGCAGATCTGCCGCTCCTGAAGGCCGCACGCGCGCCGGTGGTGGTCAATCCCAAGAGCAATCGCGAAGCGC TGTTCCGTCAGGTGCTGCCGGCAGGCACGCCCATCCTCAACTGGGGTTGCCGCGACCGCGGGGGTAAGGCGCTGTAG
Upstream 100 bases:
>100_bases CAACTGATGCGCAGCAACGATGTGAACGCGTTTCTGGTTGGCGAGACCTTCATGCGCGCGGCCGAACCCGGCGAGTCACT GCGTCAGCTATTCTTCGCGC
Downstream 100 bases:
>100_bases GTGAGCGCACGCGTCTGCTCAGGCAGTCGTTCGAGTGGGCGGAAGCGTGTGCAGTCCAGCCGGTTACGCGCCATTGAGCA AGCACACCGACCTGGGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTESYPAPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMAAMLPTRRRGVSGYVWIATFGLH RAREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVT ARRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKSNREALFRQVLPAGTPILNWGCRDRGGKAL
Sequences:
>Translated_238_residues MTESYPAPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMAAMLPTRRRGVSGYVWIATFGLH RAREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVT ARRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKSNREALFRQVLPAGTPILNWGCRDRGGKAL >Mature_237_residues TESYPAPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMAAMLPTRRRGVSGYVWIATFGLHR AREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTA RRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKSNREALFRQVLPAGTPILNWGCRDRGGKAL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26350; Mature: 26219
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESYPAPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMAAM CCCCCCCCCCCCCEEEEECCCEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH LPTRRRGVSGYVWIATFGLHRAREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGD CCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTARRHCHNEEKMRMLRERGYA EEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCC DIAIAYSDSTADLPLLKAARAPVVVNPKSNREALFRQVLPAGTPILNWGCRDRGGKAL EEEEEECCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure TESYPAPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMAAM CCCCCCCCCCCCEEEEECCCEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH LPTRRRGVSGYVWIATFGLHRAREFNRFIDAYVLKHEAQIRQRLLPHALKVFTEHRAAGD CCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTARRHCHNEEKMRMLRERGYA EEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCC DIAIAYSDSTADLPLLKAARAPVVVNPKSNREALFRQVLPAGTPILNWGCRDRGGKAL EEEEEECCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA