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The map label for this gene is cirA [C]

Identifier: 84625232

GI number: 84625232

Start: 4038856

End: 4041612

Strand: Reverse

Name: cirA [C]

Synonym: XOO_3575

Alternate gene names: 84625232

Gene position: 4041612-4038856 (Counterclockwise)

Preceding gene: 84625234

Following gene: 84625231

Centisome position: 81.81

GC content: 61.81

Gene sequence:

>2757_bases
ATGATCGCTCGTTGTTCGCTGTTGGCGCAGGCGCTGTGTTTATCGTTGTGTGCGCTGTGCGGGCATGCCGCAGCCCAGGA
GACGCAGGCCACCACACCTGCCAAGGGTGAGATGGCCACGCTGGACAAGGTCACTGTCGCCGCAACGCGCTATAACGCGA
CCGACATGCAGATGGCTGCGACCAACACCGTCAATGTGTTGTCGGCCGACGATCTCAAAACCACCGCCGTGCACAACGTC
GCCGAAGCGCTGGGCCTGATGCCGGGCGTCAACGTGATCAATACCGGGCAGTCGTATTTCGGCGGCATCGACGGCGCTGC
GCGCGGCGAAGGCATGTTCTCATCGGTACGCGGTCTCAATGCCGAATACAACGTCAACCTGATCAACGGCATCAATGTCG
CGCAAGGCATGCCGTACAGCCGCGGCGTGCAATTGAGCCTGCTGCCGCCCTCTGGCTTGCAGACCATCGCCTTGAGCAAA
ACCTCCACCGCCGATATGGACGGCGATGCGATCGGCGGCACCATCGATTACCGCACGCCCAGCGCATTCGATTCGACCGA
TCGCCAGGGCGGCAGCGTGACGCTGAGCGGACGCCTGGAAAGCCGGGCACGCGACTACGGCGATTCCGGTCTGGGCAGTG
GCGCAGCCGGCGATTGGCATGCGCGTTTCGGCGATGCGGGGCAGTTCGGCGTTGCGGTCAGTGCGTATTACGATGAGCGC
CATTTCGTCAACAGCGAAGTGGCCGCTGCCTCGGCCGCACGCAACGATGGCGCGTGGAAATTCGGTCGTGCCGATGCCAG
CGGCAAGCTGGCGGCCGGTGCCGATCCGCAGGACGTGTTACAGAGCACCGGCATGAACATCGGTTACTCGCAAGGCGACA
CGCGCCGATACGGCGGCAATGCGGCGTTCGATTGGCGCGTGGACCCCAGCCTGCATCTGTATGCACGCATGACCTACGCC
TTCGCCAAGACCGAGCAGAACACCGGCTACGCGCAGTTCGTGCCGGCCAATGTCAGCTTCACCCAGATCGGCACCAGCGG
CGTGTATCAGCCGCAGATCAATCGCGTTGCAGTGCGTTACTGGTACGAAACCAACCCCGAAAAGGCAGACCTGGCCACCG
TGCAGTTTGGTGCGGACAAGCAGCTCGGGCATTGGACATTTTCACCGAACATCTTTTACGGCACGGGCAATAACGATCGC
CCGGACCATGTGGAAATTTCCGCGCGCAACGATCAATACAGTTCGACCAACTTCGCCTATGGCGCCAACCGCTTCATCAG
CTACGACGGCAACGGCTTTCCGACGCCGTTGCTCACCCCGGCCATGCAGGCGCAGGCCTCGGATGTGGAAAGCCTGTATG
CGCGGCGCACCGGGCAGATTTCCAAGCAATACAGCGGCCAGGACAAAGGCGGCGGCAAGTTCGATGTGGCATACGATTTC
GATGCCGGGTTGCTTAGCCGTATTGCGTTCGGCGTGAAGTATGTCGACAGCTCGCGCAACTTCACTGATCGCGATTGGAC
CAATGCCAAGTACACCGACCGCACCTTGTTGCGCGACACCGGCCTGATCGCGCAGCGCTACGATTCGGTCTATCCGGGCC
AATATGCGTTTCCCACCGTGCGCCTGAGCAATGCGGCGCTCAACGACCTGATCGCACGTACGCTCACGCCTGCCAGTTTC
GACAGCTGCGGCAAGCTGGCGATCAATAACCTCAACTGCAACACCATGCGCGCCACCGAAGCGGTGAGCGCGGCCTACGC
AATGGCCACCTTGCGCAGCGGTAACTGGGAAATCCTGCCAGGCGTGCGCTTCGAACATACCGCCATCACCAACACATTCT
GGGCGCAGCCGGCCGCCATCAATGGTGCCGAGCAGGTCGGTGCGTTCGCCAACAATCACAGCCGCTACAACGTCGCTTTG
CCGAGCGTGTTCGTCAATTACCGGCCCGATGGCGATGGCGCCGTGTATCGCGGTTCGGTGTGGACCAGTTACACACGCCC
GGCATTCGTGCAGTTGGGCGGCGGCCGCTCCACCGATATTTCCAGCGACGGCCAGACCACCATCACCGAAGGCAACCCGG
ATCTCAAACCGATCAAGTCGCTCAATGTGGATGTGTCGGGCGAATGGCAGAACGACAGCGGCGGCCACGCCATGCTGGCC
GGTTATTACAAGCGCCTCACCGATTACATCTACGAGAGCGGCTCGAATGCTGCCAATCCCGGCGAAAGCGTTACCGCCAG
CACCCGTTTCGTGCGTCCGCAGAACGGCGGCGACGGCCGCGTGCTGGGCATGGAAGCGGCTGTGCGGCAGACCTTTCAGG
GCCTGCCCGCACCGCTGGATGGCTTCGGCATAGGCGCCAATGTCACCCGTCAGACCACGCGCGTGGATCTGGGGACGGAA
GGCTTCGCGCACGAACGTATCCAGAACGCGCCGAACCTGCTCGCCAATGCGGAGCTGTTCTACGAAAAGGGGCCGTGGTC
GGTCAACCTGAGCTATCACTACTCCGGCGAATACGTGTCGGTGTATGACTATCTCAACCAGGGCGCGCAGTGGGACAACC
TGTGGATCAAGCCGATCACCCGCGTCGACCTGCATCTGGGCTACGCCCCGACCGATCACCTGCGCGTGGATCTGTCGGTG
GCCAACCTCACCAACCAGCACAGCTACTGGGCGCACGTGGGCCATAATACCGACGCAATTTCCGACATCGTCGATTCCGG
CATGACCAGTCTGGTGACCGCAAAATATGTGTTCTGA

Upstream 100 bases:

>100_bases
CTTGCAGGTGTGATGCAGTTCCGCTTCCGCCGGCTGCGTCGCTTCCCCACATTGGCGGCGGCGCAGCCTTGGCGTCCTGC
TGCATTCTTCGGATTCCATC

Downstream 100 bases:

>100_bases
TCACGCACGATTCGCAGGTGGCGGCCCGACGGGCGCGCAGCAAAACGCCAACGTCATGACGGACGCGCAACAAGGCGCAG
ACCGCGCGGATGATTGCGAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; Nb-Dependent Receptor; Outer Membrane Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor; NB-Dependent Outer Membrane Fe Receptor Protein; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Receptor Protein; Exported nB-Dependent Receptor; Peptidase; Outer Membrane Receptor Family Protein; Argininosuccinate Synthase

Number of amino acids: Translated: 918; Mature: 918

Protein sequence:

>918_residues
MIARCSLLAQALCLSLCALCGHAAAQETQATTPAKGEMATLDKVTVAATRYNATDMQMAATNTVNVLSADDLKTTAVHNV
AEALGLMPGVNVINTGQSYFGGIDGAARGEGMFSSVRGLNAEYNVNLINGINVAQGMPYSRGVQLSLLPPSGLQTIALSK
TSTADMDGDAIGGTIDYRTPSAFDSTDRQGGSVTLSGRLESRARDYGDSGLGSGAAGDWHARFGDAGQFGVAVSAYYDER
HFVNSEVAAASAARNDGAWKFGRADASGKLAAGADPQDVLQSTGMNIGYSQGDTRRYGGNAAFDWRVDPSLHLYARMTYA
FAKTEQNTGYAQFVPANVSFTQIGTSGVYQPQINRVAVRYWYETNPEKADLATVQFGADKQLGHWTFSPNIFYGTGNNDR
PDHVEISARNDQYSSTNFAYGANRFISYDGNGFPTPLLTPAMQAQASDVESLYARRTGQISKQYSGQDKGGGKFDVAYDF
DAGLLSRIAFGVKYVDSSRNFTDRDWTNAKYTDRTLLRDTGLIAQRYDSVYPGQYAFPTVRLSNAALNDLIARTLTPASF
DSCGKLAINNLNCNTMRATEAVSAAYAMATLRSGNWEILPGVRFEHTAITNTFWAQPAAINGAEQVGAFANNHSRYNVAL
PSVFVNYRPDGDGAVYRGSVWTSYTRPAFVQLGGGRSTDISSDGQTTITEGNPDLKPIKSLNVDVSGEWQNDSGGHAMLA
GYYKRLTDYIYESGSNAANPGESVTASTRFVRPQNGGDGRVLGMEAAVRQTFQGLPAPLDGFGIGANVTRQTTRVDLGTE
GFAHERIQNAPNLLANAELFYEKGPWSVNLSYHYSGEYVSVYDYLNQGAQWDNLWIKPITRVDLHLGYAPTDHLRVDLSV
ANLTNQHSYWAHVGHNTDAISDIVDSGMTSLVTAKYVF

Sequences:

>Translated_918_residues
MIARCSLLAQALCLSLCALCGHAAAQETQATTPAKGEMATLDKVTVAATRYNATDMQMAATNTVNVLSADDLKTTAVHNV
AEALGLMPGVNVINTGQSYFGGIDGAARGEGMFSSVRGLNAEYNVNLINGINVAQGMPYSRGVQLSLLPPSGLQTIALSK
TSTADMDGDAIGGTIDYRTPSAFDSTDRQGGSVTLSGRLESRARDYGDSGLGSGAAGDWHARFGDAGQFGVAVSAYYDER
HFVNSEVAAASAARNDGAWKFGRADASGKLAAGADPQDVLQSTGMNIGYSQGDTRRYGGNAAFDWRVDPSLHLYARMTYA
FAKTEQNTGYAQFVPANVSFTQIGTSGVYQPQINRVAVRYWYETNPEKADLATVQFGADKQLGHWTFSPNIFYGTGNNDR
PDHVEISARNDQYSSTNFAYGANRFISYDGNGFPTPLLTPAMQAQASDVESLYARRTGQISKQYSGQDKGGGKFDVAYDF
DAGLLSRIAFGVKYVDSSRNFTDRDWTNAKYTDRTLLRDTGLIAQRYDSVYPGQYAFPTVRLSNAALNDLIARTLTPASF
DSCGKLAINNLNCNTMRATEAVSAAYAMATLRSGNWEILPGVRFEHTAITNTFWAQPAAINGAEQVGAFANNHSRYNVAL
PSVFVNYRPDGDGAVYRGSVWTSYTRPAFVQLGGGRSTDISSDGQTTITEGNPDLKPIKSLNVDVSGEWQNDSGGHAMLA
GYYKRLTDYIYESGSNAANPGESVTASTRFVRPQNGGDGRVLGMEAAVRQTFQGLPAPLDGFGIGANVTRQTTRVDLGTE
GFAHERIQNAPNLLANAELFYEKGPWSVNLSYHYSGEYVSVYDYLNQGAQWDNLWIKPITRVDLHLGYAPTDHLRVDLSV
ANLTNQHSYWAHVGHNTDAISDIVDSGMTSLVTAKYVF
>Mature_918_residues
MIARCSLLAQALCLSLCALCGHAAAQETQATTPAKGEMATLDKVTVAATRYNATDMQMAATNTVNVLSADDLKTTAVHNV
AEALGLMPGVNVINTGQSYFGGIDGAARGEGMFSSVRGLNAEYNVNLINGINVAQGMPYSRGVQLSLLPPSGLQTIALSK
TSTADMDGDAIGGTIDYRTPSAFDSTDRQGGSVTLSGRLESRARDYGDSGLGSGAAGDWHARFGDAGQFGVAVSAYYDER
HFVNSEVAAASAARNDGAWKFGRADASGKLAAGADPQDVLQSTGMNIGYSQGDTRRYGGNAAFDWRVDPSLHLYARMTYA
FAKTEQNTGYAQFVPANVSFTQIGTSGVYQPQINRVAVRYWYETNPEKADLATVQFGADKQLGHWTFSPNIFYGTGNNDR
PDHVEISARNDQYSSTNFAYGANRFISYDGNGFPTPLLTPAMQAQASDVESLYARRTGQISKQYSGQDKGGGKFDVAYDF
DAGLLSRIAFGVKYVDSSRNFTDRDWTNAKYTDRTLLRDTGLIAQRYDSVYPGQYAFPTVRLSNAALNDLIARTLTPASF
DSCGKLAINNLNCNTMRATEAVSAAYAMATLRSGNWEILPGVRFEHTAITNTFWAQPAAINGAEQVGAFANNHSRYNVAL
PSVFVNYRPDGDGAVYRGSVWTSYTRPAFVQLGGGRSTDISSDGQTTITEGNPDLKPIKSLNVDVSGEWQNDSGGHAMLA
GYYKRLTDYIYESGSNAANPGESVTASTRFVRPQNGGDGRVLGMEAAVRQTFQGLPAPLDGFGIGANVTRQTTRVDLGTE
GFAHERIQNAPNLLANAELFYEKGPWSVNLSYHYSGEYVSVYDYLNQGAQWDNLWIKPITRVDLHLGYAPTDHLRVDLSV
ANLTNQHSYWAHVGHNTDAISDIVDSGMTSLVTAKYVF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99026; Mature: 99026

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARCSLLAQALCLSLCALCGHAAAQETQATTPAKGEMATLDKVTVAATRYNATDMQMAA
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCCEEEEE
TNTVNVLSADDLKTTAVHNVAEALGLMPGVNVINTGQSYFGGIDGAARGEGMFSSVRGLN
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCHHHHHHCCC
AEYNVNLINGINVAQGMPYSRGVQLSLLPPSGLQTIALSKTSTADMDGDAIGGTIDYRTP
CEEEEEEEECCCHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCC
SAFDSTDRQGGSVTLSGRLESRARDYGDSGLGSGAAGDWHARFGDAGQFGVAVSAYYDER
CCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCH
HFVNSEVAAASAARNDGAWKFGRADASGKLAAGADPQDVLQSTGMNIGYSQGDTRRYGGN
HHCCCHHHHHHHCCCCCCEEECCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCEECCCC
AAFDWRVDPSLHLYARMTYAFAKTEQNTGYAQFVPANVSFTQIGTSGVYQPQINRVAVRY
EEEEEEECCCEEEEEEEEEHEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEEE
WYETNPEKADLATVQFGADKQLGHWTFSPNIFYGTGNNDRPDHVEISARNDQYSSTNFAY
EECCCCCCCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCCCCCCEEC
GANRFISYDGNGFPTPLLTPAMQAQASDVESLYARRTGQISKQYSGQDKGGGKFDVAYDF
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEC
DAGLLSRIAFGVKYVDSSRNFTDRDWTNAKYTDRTLLRDTGLIAQRYDSVYPGQYAFPTV
CHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCEE
RLSNAALNDLIARTLTPASFDSCGKLAINNLNCNTMRATEAVSAAYAMATLRSGNWEILP
EECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEC
GVRFEHTAITNTFWAQPAAINGAEQVGAFANNHSRYNVALPSVFVNYRPDGDGAVYRGSV
CCEEECEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCEEECCE
WTSYTRPAFVQLGGGRSTDISSDGQTTITEGNPDLKPIKSLNVDVSGEWQNDSGGHAMLA
EECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHCCCEECCCCCCCCCCCHHHH
GYYKRLTDYIYESGSNAANPGESVTASTRFVRPQNGGDGRVLGMEAAVRQTFQGLPAPLD
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCC
GFGIGANVTRQTTRVDLGTEGFAHERIQNAPNLLANAELFYEKGPWSVNLSYHYSGEYVS
CCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHCCCEEEEECCCEEEEEEEEECCCEEE
VYDYLNQGAQWDNLWIKPITRVDLHLGYAPTDHLRVDLSVANLTNQHSYWAHVGHNTDAI
EEHHHHCCCCCCCEEECEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHH
SDIVDSGMTSLVTAKYVF
HHHHHCCHHHHHEEEECC
>Mature Secondary Structure
MIARCSLLAQALCLSLCALCGHAAAQETQATTPAKGEMATLDKVTVAATRYNATDMQMAA
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCCEEEEE
TNTVNVLSADDLKTTAVHNVAEALGLMPGVNVINTGQSYFGGIDGAARGEGMFSSVRGLN
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCHHHHHHCCC
AEYNVNLINGINVAQGMPYSRGVQLSLLPPSGLQTIALSKTSTADMDGDAIGGTIDYRTP
CEEEEEEEECCCHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCC
SAFDSTDRQGGSVTLSGRLESRARDYGDSGLGSGAAGDWHARFGDAGQFGVAVSAYYDER
CCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCH
HFVNSEVAAASAARNDGAWKFGRADASGKLAAGADPQDVLQSTGMNIGYSQGDTRRYGGN
HHCCCHHHHHHHCCCCCCEEECCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCEECCCC
AAFDWRVDPSLHLYARMTYAFAKTEQNTGYAQFVPANVSFTQIGTSGVYQPQINRVAVRY
EEEEEEECCCEEEEEEEEEHEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEEE
WYETNPEKADLATVQFGADKQLGHWTFSPNIFYGTGNNDRPDHVEISARNDQYSSTNFAY
EECCCCCCCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCCCCCCEEC
GANRFISYDGNGFPTPLLTPAMQAQASDVESLYARRTGQISKQYSGQDKGGGKFDVAYDF
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEC
DAGLLSRIAFGVKYVDSSRNFTDRDWTNAKYTDRTLLRDTGLIAQRYDSVYPGQYAFPTV
CHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCEE
RLSNAALNDLIARTLTPASFDSCGKLAINNLNCNTMRATEAVSAAYAMATLRSGNWEILP
EECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEC
GVRFEHTAITNTFWAQPAAINGAEQVGAFANNHSRYNVALPSVFVNYRPDGDGAVYRGSV
CCEEECEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCEEECCE
WTSYTRPAFVQLGGGRSTDISSDGQTTITEGNPDLKPIKSLNVDVSGEWQNDSGGHAMLA
EECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHCCCEECCCCCCCCCCCHHHH
GYYKRLTDYIYESGSNAANPGESVTASTRFVRPQNGGDGRVLGMEAAVRQTFQGLPAPLD
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCC
GFGIGANVTRQTTRVDLGTEGFAHERIQNAPNLLANAELFYEKGPWSVNLSYHYSGEYVS
CCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHCCCEEEEECCCEEEEEEEEECCCEEE
VYDYLNQGAQWDNLWIKPITRVDLHLGYAPTDHLRVDLSVANLTNQHSYWAHVGHNTDAI
EEHHHHCCCCCCCEEECEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHH
SDIVDSGMTSLVTAKYVF
HHHHHCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA