| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is appA [H]
Identifier: 84625231
GI number: 84625231
Start: 4037268
End: 4038374
Strand: Reverse
Name: appA [H]
Synonym: XOO_3574
Alternate gene names: 84625231
Gene position: 4038374-4037268 (Counterclockwise)
Preceding gene: 84625232
Following gene: 84625230
Centisome position: 81.74
GC content: 68.02
Gene sequence:
>1107_bases GTGCGCGCACCGCTGCAAGGGGAGGCCGCTGCCGCGCACTATGCCGATCAACCCTGGCCGCAGTGGTCCACGCCTGCCAG CCTGCTCACTCCGCATGGTCGCAAAGGTGTGCAATTGAGCGGCGAGTACCTGCGTCAGTGGTTGGCGCAGCAGGCCTTGC TGCCGAGCAGTGGGTGCCCGGCCACCGGCAGCGTGTCGGTGTGGGCCAACACCGATCAACGCACCATCGATAGTGGCGCC CTGCTGGCCGATGCACTGGCCCCTGGTTGCGGCATTGTTGCTGGGCATCGGGAGGCTGGCAGCAACGATCCGCTGTTCCG ACCGATCGAAGCCGGCGCGGTGCCGTTCGACGCGACCGCAGCGGTGGCATCGATCCAGCAACAGACCGGGGGCCCTGCCG CCTTGCTGCAAGGCCACGCCGCCGAGCTGCAGGCACTGCAGCAGATTCTGGGCTGCACGCGGACGCCCTGCGATTTCGCG CAGATGCCTTCCACACTGGCGCCGTCGGCCAACGGGCGTGGCCTTAGATTAGGCGGGCCAATCGACCTGACCTCCGGCAC CGGCGAGGTGTTGCTGCTGCAATACGCAGAAGGCTTGCCGCTCTCGCAGGTTGGCTGGGGCCGCGCCACACCCGAGCGCC TGGCGCAGGTCTCGCGCTTGCACGCGCTGCAGTTCGACATCTACGCACGGCCGCACTACATGGCTGCGCGGTCGGGTGCA CCACTGGCGCGTGAGGTCTTGCAACGTTTCAGCGATGCGCAGGCGCCGAAAGTCTCGCTGTTCGTCGGCAGCGACACCCA CATCGCCGCATTGAGCGGCCTGCTGGGCGCGCATTTCCATCTGCCTGGCTACGGCGCCGACGACCCGCCACCGGGCGGCG CCCTGTTGCTTGGTTTGTGGCGCGAACCCAGCGGCGAGCGGGTGGTGCGTGCCCAATACCTGGCGCAATCGCTGGATCAG CTGCGTACCCTGGCACCGCTGGATCTGGCTCACCCACCACTGCAGCAGCGGGTGGCCCTGGGGCTGTGCGCTCCGCTGCA AGGGATGGCCTGCCCATTGCCGGAGTTTGCCAAGGCGCTGGAGCAGCAGCTGCGGCTTGATCGGTAA
Upstream 100 bases:
>100_bases TCAATCGACCGACACCGCCAGCCAACGGGCAGGCGTCAGGGCGCCGGCCTCGGCGCAGAGCGCGCAACTGGAGCGCGTGG TGGTGGTGTTCCGGCATGGC
Downstream 100 bases:
>100_bases CTTAGCTAGGGCCTGTTAACATTAATGTCTCGAGCGATTAAACTATTGGGCATGGAGATCACGCCAGCACAATTTGCACT CATCGAGCATTGCCTACCTT
Product: phosphoanhydride phosphohydrolase
Products: NA
Alternate protein names: Phosphoanhydride phosphohydrolase; pH 2.5 acid phosphatase; AP; 4-phytase [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRAPLQGEAAAAHYADQPWPQWSTPASLLTPHGRKGVQLSGEYLRQWLAQQALLPSSGCPATGSVSVWANTDQRTIDSGA LLADALAPGCGIVAGHREAGSNDPLFRPIEAGAVPFDATAAVASIQQQTGGPAALLQGHAAELQALQQILGCTRTPCDFA QMPSTLAPSANGRGLRLGGPIDLTSGTGEVLLLQYAEGLPLSQVGWGRATPERLAQVSRLHALQFDIYARPHYMAARSGA PLAREVLQRFSDAQAPKVSLFVGSDTHIAALSGLLGAHFHLPGYGADDPPPGGALLLGLWREPSGERVVRAQYLAQSLDQ LRTLAPLDLAHPPLQQRVALGLCAPLQGMACPLPEFAKALEQQLRLDR
Sequences:
>Translated_368_residues MRAPLQGEAAAAHYADQPWPQWSTPASLLTPHGRKGVQLSGEYLRQWLAQQALLPSSGCPATGSVSVWANTDQRTIDSGA LLADALAPGCGIVAGHREAGSNDPLFRPIEAGAVPFDATAAVASIQQQTGGPAALLQGHAAELQALQQILGCTRTPCDFA QMPSTLAPSANGRGLRLGGPIDLTSGTGEVLLLQYAEGLPLSQVGWGRATPERLAQVSRLHALQFDIYARPHYMAARSGA PLAREVLQRFSDAQAPKVSLFVGSDTHIAALSGLLGAHFHLPGYGADDPPPGGALLLGLWREPSGERVVRAQYLAQSLDQ LRTLAPLDLAHPPLQQRVALGLCAPLQGMACPLPEFAKALEQQLRLDR >Mature_368_residues MRAPLQGEAAAAHYADQPWPQWSTPASLLTPHGRKGVQLSGEYLRQWLAQQALLPSSGCPATGSVSVWANTDQRTIDSGA LLADALAPGCGIVAGHREAGSNDPLFRPIEAGAVPFDATAAVASIQQQTGGPAALLQGHAAELQALQQILGCTRTPCDFA QMPSTLAPSANGRGLRLGGPIDLTSGTGEVLLLQYAEGLPLSQVGWGRATPERLAQVSRLHALQFDIYARPHYMAARSGA PLAREVLQRFSDAQAPKVSLFVGSDTHIAALSGLLGAHFHLPGYGADDPPPGGALLLGLWREPSGERVVRAQYLAQSLDQ LRTLAPLDLAHPPLQQRVALGLCAPLQGMACPLPEFAKALEQQLRLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidine acid phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1787215, Length=390, Percent_Identity=31.5384615384615, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1787237, Length=380, Percent_Identity=27.1052631578947, Blast_Score=136, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000560 [H]
Pfam domain/function: PF00328 Acid_phosphat_A [H]
EC number: =3.1.3.2; =3.1.3.26 [H]
Molecular weight: Translated: 38788; Mature: 38788
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPLQGEAAAAHYADQPWPQWSTPASLLTPHGRKGVQLSGEYLRQWLAQQALLPSSGCP CCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCCCC ATGSVSVWANTDQRTIDSGALLADALAPGCGIVAGHREAGSNDPLFRPIEAGAVPFDATA CCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCHHH AVASIQQQTGGPAALLQGHAAELQALQQILGCTRTPCDFAQMPSTLAPSANGRGLRLGGP HHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCC IDLTSGTGEVLLLQYAEGLPLSQVGWGRATPERLAQVSRLHALQFDIYARPHYMAARSGA EEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHCCCCC PLAREVLQRFSDAQAPKVSLFVGSDTHIAALSGLLGAHFHLPGYGADDPPPGGALLLGLW HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEE REPSGERVVRAQYLAQSLDQLRTLAPLDLAHPPLQQRVALGLCAPLQGMACPLPEFAKAL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH EQQLRLDR HHHHCCCC >Mature Secondary Structure MRAPLQGEAAAAHYADQPWPQWSTPASLLTPHGRKGVQLSGEYLRQWLAQQALLPSSGCP CCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCCCC ATGSVSVWANTDQRTIDSGALLADALAPGCGIVAGHREAGSNDPLFRPIEAGAVPFDATA CCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCHHH AVASIQQQTGGPAALLQGHAAELQALQQILGCTRTPCDFAQMPSTLAPSANGRGLRLGGP HHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCC IDLTSGTGEVLLLQYAEGLPLSQVGWGRATPERLAQVSRLHALQFDIYARPHYMAARSGA EEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHCCCCC PLAREVLQRFSDAQAPKVSLFVGSDTHIAALSGLLGAHFHLPGYGADDPPPGGALLLGLW HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEE REPSGERVVRAQYLAQSLDQLRTLAPLDLAHPPLQQRVALGLCAPLQGMACPLPEFAKAL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH EQQLRLDR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2168385; 8905232; 9278503; 3038201; 1658595; 8387749; 10696472; 1429631; 10655611 [H]