| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625219
Identifier: 84625219
GI number: 84625219
Start: 4023698
End: 4023943
Strand: Reverse
Name: 84625219
Synonym: XOO_3562
Alternate gene names: NA
Gene position: 4023943-4023698 (Counterclockwise)
Preceding gene: 84625220
Following gene: 84625218
Centisome position: 81.45
GC content: 60.57
Gene sequence:
>246_bases GTGAGAATGGTTATTATTTGTATGGCCAACCGACTGGAGATCCAGATCATGACCGCTCACCCCGTGCTGCTCCGCTCCGA ACCGGTCAACCTGCGCGACCGCGCTGCGCCGCGTGCCGTGCCCGCCGAAGACCTCATCAGCAGCGAGGCGCTGCTCAAGG GCCGTCGTGAAGTGCTGATCCAGCATGGCGACCGCGTCTATCGCCTGCGCCACACCAGCAACGACAAGTTAATTCTGACC AAGTAA
Upstream 100 bases:
>100_bases AGCCGCTGTCCGCGTGCGTTTTGATTGGCTGAGTCAATCGAAATTCGATAGGTGATCCAAACATCAAGTCGTTCAAATGA GAATGCCTCTTGATCATTAA
Downstream 100 bases:
>100_bases TGCCAGCAATGCGCCTATGGAGCGGCTAACAGAACGTCGCGGGCCGTCGTCATGTGGCTTGGATCGCGCGCAGGGACCAC AGGGTACGAGTGTGGTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MRMVIICMANRLEIQIMTAHPVLLRSEPVNLRDRAAPRAVPAEDLISSEALLKGRREVLIQHGDRVYRLRHTSNDKLILT K
Sequences:
>Translated_81_residues MRMVIICMANRLEIQIMTAHPVLLRSEPVNLRDRAAPRAVPAEDLISSEALLKGRREVLIQHGDRVYRLRHTSNDKLILT K >Mature_81_residues MRMVIICMANRLEIQIMTAHPVLLRSEPVNLRDRAAPRAVPAEDLISSEALLKGRREVLIQHGDRVYRLRHTSNDKLILT K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9311; Mature: 9311
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMVIICMANRLEIQIMTAHPVLLRSEPVNLRDRAAPRAVPAEDLISSEALLKGRREVLI CEEEEEEECCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCHHHHHCCCHHEEE QHGDRVYRLRHTSNDKLILTK ECCCEEEEEEECCCCEEEEEC >Mature Secondary Structure MRMVIICMANRLEIQIMTAHPVLLRSEPVNLRDRAAPRAVPAEDLISSEALLKGRREVLI CEEEEEEECCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCHHHHHCCCHHEEE QHGDRVYRLRHTSNDKLILTK ECCCEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA