| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625218
Identifier: 84625218
GI number: 84625218
Start: 4022414
End: 4023061
Strand: Reverse
Name: 84625218
Synonym: XOO_3561
Alternate gene names: NA
Gene position: 4023061-4022414 (Counterclockwise)
Preceding gene: 84625219
Following gene: 84625210
Centisome position: 81.43
GC content: 64.35
Gene sequence:
>648_bases ATGCCCAACGTGCGCACCTTGCCTTTATCGTTTCAGTTACCTGCCACCCGCGCAGCATTGCCGCGACCGCAGCAGTTGGC GGCCTTGGGGACCGTGCTTTGCCTGTATCTGCCCGCATTGGGTAACGCATTGGATGGCTGGCAGCACGCAGTCACTGCGG CCGCGTGCCGGCAGGTCGATAGCGATGGCGTGCGCGAAAGCATCTGTTTTTTCGATGCCGCGGGACACTGCTGCTGGCGG CTGTGCCTGCTGCCGGATAGCGATTTCCTGAGCTGGGATCGTCTGATCTCAAGGCTGCCGCCACTCACGCTGGACACGCA CGAGCTGGGCGTCGGCGAACGGCTCTGGCGCCGCCTGGCCGGGCGCTTGCACGGCAATACATGGAGACTGAGCGCAGTGC GTCTGCAAACCGCAGGTAGCCGTAACCGATCCCTAGCCGCCAACCTCGCCACCGTCTCAGCGCTGGGCGCAGAGGTTGCG GCGCGGCTAGCGCGCGAAGAGGGCATCGACGGCCGCATAGCCGTGGACGATTGCTGTTGCGCGCGCAGCGGCTTTGCGTA CGGTTGCACGATGAGCAGATGCATTGCTCTGCAGAAGCGCGCGATGCAGCGTTGGCAATCACGCCGCATCGCGCGCACCC ATTTCTAA
Upstream 100 bases:
>100_bases CGCCGCCCAACGGCATAGTGGTCGGCAGCACGGAAGGTGACCGCTTTACCTGCGCTCCATGTACTGCCTCAGTTAGCCAA ACTGTGAGCTGGTAGCGGCC
Downstream 100 bases:
>100_bases GAGCGGCTAACAACACGACTGCGCTCACCGCCGGGCGGGCGCGGCCGGTGCTCGGAATCGGCATGTACCACGGGTCCGCT GCGGTTCTGAGCGCGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPNVRTLPLSFQLPATRAALPRPQQLAALGTVLCLYLPALGNALDGWQHAVTAAACRQVDSDGVRESICFFDAAGHCCWR LCLLPDSDFLSWDRLISRLPPLTLDTHELGVGERLWRRLAGRLHGNTWRLSAVRLQTAGSRNRSLAANLATVSALGAEVA ARLAREEGIDGRIAVDDCCCARSGFAYGCTMSRCIALQKRAMQRWQSRRIARTHF
Sequences:
>Translated_215_residues MPNVRTLPLSFQLPATRAALPRPQQLAALGTVLCLYLPALGNALDGWQHAVTAAACRQVDSDGVRESICFFDAAGHCCWR LCLLPDSDFLSWDRLISRLPPLTLDTHELGVGERLWRRLAGRLHGNTWRLSAVRLQTAGSRNRSLAANLATVSALGAEVA ARLAREEGIDGRIAVDDCCCARSGFAYGCTMSRCIALQKRAMQRWQSRRIARTHF >Mature_214_residues PNVRTLPLSFQLPATRAALPRPQQLAALGTVLCLYLPALGNALDGWQHAVTAAACRQVDSDGVRESICFFDAAGHCCWRL CLLPDSDFLSWDRLISRLPPLTLDTHELGVGERLWRRLAGRLHGNTWRLSAVRLQTAGSRNRSLAANLATVSALGAEVAA RLAREEGIDGRIAVDDCCCARSGFAYGCTMSRCIALQKRAMQRWQSRRIARTHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23684; Mature: 23552
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVRTLPLSFQLPATRAALPRPQQLAALGTVLCLYLPALGNALDGWQHAVTAAACRQVD CCCCEECEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SDGVRESICFFDAAGHCCWRLCLLPDSDFLSWDRLISRLPPLTLDTHELGVGERLWRRLA CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHCCCCEECHHHCCHHHHHHHHHH GRLHGNTWRLSAVRLQTAGSRNRSLAANLATVSALGAEVAARLAREEGIDGRIAVDDCCC HHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH ARSGFAYGCTMSRCIALQKRAMQRWQSRRIARTHF HCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure PNVRTLPLSFQLPATRAALPRPQQLAALGTVLCLYLPALGNALDGWQHAVTAAACRQVD CCCEECEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC SDGVRESICFFDAAGHCCWRLCLLPDSDFLSWDRLISRLPPLTLDTHELGVGERLWRRLA CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHCCCCEECHHHCCHHHHHHHHHH GRLHGNTWRLSAVRLQTAGSRNRSLAANLATVSALGAEVAARLAREEGIDGRIAVDDCCC HHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH ARSGFAYGCTMSRCIALQKRAMQRWQSRRIARTHF HCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA