| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625202
Identifier: 84625202
GI number: 84625202
Start: 4005912
End: 4006403
Strand: Reverse
Name: 84625202
Synonym: XOO_3545
Alternate gene names: NA
Gene position: 4006403-4005912 (Counterclockwise)
Preceding gene: 84625203
Following gene: 84625201
Centisome position: 81.1
GC content: 66.26
Gene sequence:
>492_bases ATGCGGTGGCTCAGGCATATTTTCGCGCCCTCGGCGCAGCGTCGTTTTCCAGCCGCGTGCATGGACGCCATCGCCGCGGC GGTCACTGCCAGCGAGCGCTCGCATACCGGACAGATCATGGTTGCGGTCGAGGCCGATCTGCCATTGGAGGCGTTGTGGC GCGGGCACAGCGCCCGTCAGCGCGCCGAGCAGGCTTTCGCGCAGTTGCGCACCTGGGACACCGAGGCCAACAACGGGGTC CTGATTTACCTGCTGCTGGCCGAACACGCCATCGAGGTAGTGGCCGACCGCGGCCTGCGCAGTCGGGTGCCGGAAGAATG CTGGGCAGAGGTCTGCCGACGCATGCAGCAATTCCTGCGCGAAGGCCAGCACGAAGCGGCGGTCCTGGCTGGCATCGAGG CGGTGACCGAGCTGTTGGCCGAGCATTTCCCGGCCACGGACCGTGCGCAGCATGAAGATGAGCTACCCAATCGTCCGCAG CTTTTCGGCTGA
Upstream 100 bases:
>100_bases TCGGTGGCTTTGGCGGCGGCCGTGGCGGTTTCGGCGGCGGTGGTGGCTGGGGCGGTGGCGGCGGGTCATCAGGAGGCGGT GGCGCCTCGGGGAGCTGGTA
Downstream 100 bases:
>100_bases GCGCGTCCAAGGTGTCAGAATAGCGGCCTCGCTGTTTCGTGATACGCGGTCCGCATGATCTATCTGCACGCCATCGACCC CATCGCTTTCTCGCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRWLRHIFAPSAQRRFPAACMDAIAAAVTASERSHTGQIMVAVEADLPLEALWRGHSARQRAEQAFAQLRTWDTEANNGV LIYLLLAEHAIEVVADRGLRSRVPEECWAEVCRRMQQFLREGQHEAAVLAGIEAVTELLAEHFPATDRAQHEDELPNRPQ LFG
Sequences:
>Translated_163_residues MRWLRHIFAPSAQRRFPAACMDAIAAAVTASERSHTGQIMVAVEADLPLEALWRGHSARQRAEQAFAQLRTWDTEANNGV LIYLLLAEHAIEVVADRGLRSRVPEECWAEVCRRMQQFLREGQHEAAVLAGIEAVTELLAEHFPATDRAQHEDELPNRPQ LFG >Mature_163_residues MRWLRHIFAPSAQRRFPAACMDAIAAAVTASERSHTGQIMVAVEADLPLEALWRGHSARQRAEQAFAQLRTWDTEANNGV LIYLLLAEHAIEVVADRGLRSRVPEECWAEVCRRMQQFLREGQHEAAVLAGIEAVTELLAEHFPATDRAQHEDELPNRPQ LFG
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18360; Mature: 18360
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50096 IQ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLRHIFAPSAQRRFPAACMDAIAAAVTASERSHTGQIMVAVEADLPLEALWRGHSARQ CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCHHHH RAEQAFAQLRTWDTEANNGVLIYLLLAEHAIEVVADRGLRSRVPEECWAEVCRRMQQFLR HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH EGQHEAAVLAGIEAVTELLAEHFPATDRAQHEDELPNRPQLFG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MRWLRHIFAPSAQRRFPAACMDAIAAAVTASERSHTGQIMVAVEADLPLEALWRGHSARQ CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCHHHH RAEQAFAQLRTWDTEANNGVLIYLLLAEHAIEVVADRGLRSRVPEECWAEVCRRMQQFLR HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH EGQHEAAVLAGIEAVTELLAEHFPATDRAQHEDELPNRPQLFG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA