| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625127
Identifier: 84625127
GI number: 84625127
Start: 3929240
End: 3930109
Strand: Reverse
Name: 84625127
Synonym: XOO_3470
Alternate gene names: NA
Gene position: 3930109-3929240 (Counterclockwise)
Preceding gene: 84625128
Following gene: 84625118
Centisome position: 79.55
GC content: 64.02
Gene sequence:
>870_bases GTGGGCAGGGGGCAGGAGTTTCACATCCGTAACTTTCATGTCTTAGGAGAGAAAGACGATGAAGTCGAAGTCGATGTGCA CCGCGGTGGGTCTGATCGTCATGTGCCTGGCCGGTTCGGCCGTCGCTGCCGGCAAACCGCTCTATCAAACCGGGCCTGCG CCAAGCCGCAGTGCCGCCGCCACCGACTGCTCCGGCTGCACTGTTGGTCTAACCCCAACATCAGCTACAACGGCGTGCCC ATGGGCAATGCCAGCACCGCCGACAACCAACGCGCGCTGGTCAACACCAAGGCCACGATTGCCGGCTTCCGTTCAGTCTC GTGGAGTGATCCAAACCTGGCCCGGCACCGCACGTGCCGGGCGTTTTTACGCTACACCCACGCGCGTGGATCGCGCAGAC TAGGCGCACCGCCGGTCACTGCCGGCCCTGTCTTGTCGAGCGGAGCCTTCATGTCCACGCCCCTGCGTTATGCGCTTGTC TGCCTGGCCGCACTGGCGGTTGCCGGATGCAAGCAGCAACCGGCCGAGCCCGTTGCCACGCAGCCCAAGCCTGCCGTTAC CGCGCCTGCAGCGCCCGCCAGTGAGGACGCGCAAACCCGCGCGCTGCATGTGCTTGAAGCCCGTTTGCAGAGCGACCATG TGTACCCGGATAACTGCATCGGGATCATGGCCGAGGAAGGCGATGCGCCTTCGCCTGACGCTTTCGATTTTGCAGTGCGC GAACGCCACGGCGACGGTTGCCCCGGTGATCCGCAGACCAGCCCGGTACGCGACCGTTTCCGCGTGCAGGCCGATGGCAC GTTGCTGTGGTACGACGTAGTAAATGCGGATTTCTTCGACTACGCGCAGCGTGCGCGAAGCATGCAGTGA
Upstream 100 bases:
>100_bases GCTGGAATCGCATCCAGGCGTCGGCAAACATCGCAGAACCGTAATTTTCTATTGCAACAACCTGCATTCGGTCCGGTGCA ACGCGCCCTGATGGCGTCCC
Downstream 100 bases:
>100_bases TGCTTTGTGGTCATTGATCCAGTGCAGACTGACTGCGCGCAGATGTCAGCAAGCGCCACGACAGCCGTTGCGTAGCGGCG AGGCGGTCGCGTAAGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Endopeptidase Asp-N [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVP MGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALV CLAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ
Sequences:
>Translated_289_residues MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVP MGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALV CLAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ >Mature_288_residues GRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVPM GNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVC LAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVRE RHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ
Specific function: Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M72 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.4.24.33 [H]
Molecular weight: Translated: 31765; Mature: 31634
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRR CCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH HRLLRLHCWSNPNISYNGVPMGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCR CCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHH AFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVCLAALAVAGCKQQPAEPVAT HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC QPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHH ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ HHCCCCCCCCCCCCCCCHHEEEEECCEEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure GRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRR CCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH HRLLRLHCWSNPNISYNGVPMGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCR CCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHH AFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVCLAALAVAGCKQQPAEPVAT HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC QPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHH ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ HHCCCCCCCCCCCCCCCHHEEEEECCEEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]