Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625127

Identifier: 84625127

GI number: 84625127

Start: 3929240

End: 3930109

Strand: Reverse

Name: 84625127

Synonym: XOO_3470

Alternate gene names: NA

Gene position: 3930109-3929240 (Counterclockwise)

Preceding gene: 84625128

Following gene: 84625118

Centisome position: 79.55

GC content: 64.02

Gene sequence:

>870_bases
GTGGGCAGGGGGCAGGAGTTTCACATCCGTAACTTTCATGTCTTAGGAGAGAAAGACGATGAAGTCGAAGTCGATGTGCA
CCGCGGTGGGTCTGATCGTCATGTGCCTGGCCGGTTCGGCCGTCGCTGCCGGCAAACCGCTCTATCAAACCGGGCCTGCG
CCAAGCCGCAGTGCCGCCGCCACCGACTGCTCCGGCTGCACTGTTGGTCTAACCCCAACATCAGCTACAACGGCGTGCCC
ATGGGCAATGCCAGCACCGCCGACAACCAACGCGCGCTGGTCAACACCAAGGCCACGATTGCCGGCTTCCGTTCAGTCTC
GTGGAGTGATCCAAACCTGGCCCGGCACCGCACGTGCCGGGCGTTTTTACGCTACACCCACGCGCGTGGATCGCGCAGAC
TAGGCGCACCGCCGGTCACTGCCGGCCCTGTCTTGTCGAGCGGAGCCTTCATGTCCACGCCCCTGCGTTATGCGCTTGTC
TGCCTGGCCGCACTGGCGGTTGCCGGATGCAAGCAGCAACCGGCCGAGCCCGTTGCCACGCAGCCCAAGCCTGCCGTTAC
CGCGCCTGCAGCGCCCGCCAGTGAGGACGCGCAAACCCGCGCGCTGCATGTGCTTGAAGCCCGTTTGCAGAGCGACCATG
TGTACCCGGATAACTGCATCGGGATCATGGCCGAGGAAGGCGATGCGCCTTCGCCTGACGCTTTCGATTTTGCAGTGCGC
GAACGCCACGGCGACGGTTGCCCCGGTGATCCGCAGACCAGCCCGGTACGCGACCGTTTCCGCGTGCAGGCCGATGGCAC
GTTGCTGTGGTACGACGTAGTAAATGCGGATTTCTTCGACTACGCGCAGCGTGCGCGAAGCATGCAGTGA

Upstream 100 bases:

>100_bases
GCTGGAATCGCATCCAGGCGTCGGCAAACATCGCAGAACCGTAATTTTCTATTGCAACAACCTGCATTCGGTCCGGTGCA
ACGCGCCCTGATGGCGTCCC

Downstream 100 bases:

>100_bases
TGCTTTGTGGTCATTGATCCAGTGCAGACTGACTGCGCGCAGATGTCAGCAAGCGCCACGACAGCCGTTGCGTAGCGGCG
AGGCGGTCGCGTAAGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Endopeptidase Asp-N [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVP
MGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALV
CLAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR
ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ

Sequences:

>Translated_289_residues
MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVP
MGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALV
CLAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR
ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ
>Mature_288_residues
GRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRRHRLLRLHCWSNPNISYNGVPM
GNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCRAFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVC
LAALAVAGCKQQPAEPVATQPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVRE
RHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ

Specific function: Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M72 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =3.4.24.33 [H]

Molecular weight: Translated: 31765; Mature: 31634

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRR
CCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
HRLLRLHCWSNPNISYNGVPMGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCR
CCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHH
AFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVCLAALAVAGCKQQPAEPVAT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
QPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ
HHCCCCCCCCCCCCCCCHHEEEEECCEEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GRGQEFHIRNFHVLGEKDDEVEVDVHRGGSDRHVPGRFGRRCRQTALSNRACAKPQCRR
CCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
HRLLRLHCWSNPNISYNGVPMGNASTADNQRALVNTKATIAGFRSVSWSDPNLARHRTCR
CCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHH
AFLRYTHARGSRRLGAPPVTAGPVLSSGAFMSTPLRYALVCLAALAVAGCKQQPAEPVAT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
QPKPAVTAPAAPASEDAQTRALHVLEARLQSDHVYPDNCIGIMAEEGDAPSPDAFDFAVR
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
ERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFFDYAQRARSMQ
HHCCCCCCCCCCCCCCCHHEEEEECCEEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]