| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625093
Identifier: 84625093
GI number: 84625093
Start: 3893511
End: 3895850
Strand: Reverse
Name: 84625093
Synonym: XOO_3436
Alternate gene names: NA
Gene position: 3895850-3893511 (Counterclockwise)
Preceding gene: 84625098
Following gene: 84625092
Centisome position: 78.86
GC content: 65.43
Gene sequence:
>2340_bases ATGACTTTTCAGCCCAGTCCGTCGGGACACCCGGGCCGCGACCAACGCTTGCTCGAACAGGCGCATGACGTGTTCGTGCC CGCACTCGCGCAGGTGTTTGCTGCTGCAGTCGCGCATTTCGACGATGTGCTGTTCGACCGTGCCGAATCCGCTGGCACGT CGCAGTTGCTGTTTCTCGATGGCATGCGCGAATTGCGCCGCAAGTGCGAAGAGGTTGCCAGTCAGTTCCGCCAACAGTTG GAAGACGGCTGGCAGGCGCTGGTGCTCGGGACGCCGTTGTCGGCCGACGTAGTACTGGCCGGCGACATGGGCACCGGCCC GCTGAGTCTGGTGCCCGAACACGTGCTGGAATCGCGGCTGGCAGTGCGCAATCTGGCCACCGTCCTGTTGCGTGATTTCA AGCCGGTGCTGGCGCGGGTCGACCGCCGCCTGGGCTGGATTGCCGGTGGGCTGGAATTGATGGCCGACACCAACCCCATT GGACCGGAACATCTCGGCGTGGCGATTCACAGAGCCTTCGCCACCTGCGACCTGGCGCCGGAAGTGCGGCTGCTGCTGAT CAAGCTGTGCGAGCGCGATCTGGCCGAGCCGATCGGCAGGTTGTATGTGCGCCTGGACGAGACCCTGGCCAAGGCCGGCG TGGTGCCGGAGATGTCGCAGGCCAAGCGCGCGCCGCCGCGTGGCGACACGCCCGAGGAGCGCGCTCAGGCCCAGGCCCAG GGGAGTGCCGAGATGGGCGGCGACGAGCAGGGCGATCAATACGCGCCGGCCTGGTCCAACCGTTTTCTCGACCGCTGGGC GCATAGCCGCGGCCGCATGCAGGCCGCGACGCAGCGCGGCCATGCCGATGACGGCAGTGCGGGCGGCATGGACGGCGAGA CCGATCATCAGGGCGGTAGCCAGGGCATGTTGCTCGAAGCGCTGCAAGAGTTGCTGCAGCAGACGCGCAGCGTGCGCGAC ACCGCTGCGTCCGCAGCAACGGTTGCGGTCGGCCAGCAACGCCCGTTGAGCCAGCGCGAAATGATGTCGGTGCTATCGCT GCTGCAGGCCACGCCCAGCGCGACGCTGCAGGCGGCCATCGGCGATGACGACGAATCGCTTGCGCAGCGTTTGAAGAACG AGGTGTTGTCCAGCGTCACGCGGCTGGGCGTGGACCCGGCCACGGCAAAGCTCGACCCGATGGACGAAGATGCCATCGAC CTGGTCGGCATGCTGTTCGACGTCATGCTTGACGAGCGCGATCTGGAAAATCGTTCGCGCGAAATGATCGGCCGTCTTGT GGTGCCGTTCGTCAAGGTCGCATTGCTGGACCGCAAGATGTTCGTGCAGAAGACCCATCCAGCGCGGCGTCTGCTCAACG CGTTGGCCGAGGCCTGCGAGGGCAACAACGGCGACAGCGCTGCCGAGCGCGTGCTGATGGGCAAGGTCGAAGAAATCGTC GACCGCCTGGTCGCCGAATTCAACGAGAACCTGGCGATCTTCCTTACCTTGGAAGAAGAATTCCGCGACTTCCTGTCGCA GCATCGGCGTCGGGTGGAAATTGCCGAACGTCGTGCCACTGAAACCCAACGTGGCCAGGAAAAGCTGGAACTGGCACGCA GCCGCGCGCTGTCGGAGCTGAAGCAGCGCGTGCCCGAAGATGCCGGCCTTCCGAACGCCGTGGAAGATTTCCTGCGCCAG CCGTGGCTGCATCACATGACCATGGCGATTCTGCGCGACGGCGACGAAGGCCCGGGCACCATCGAGGCGCTGGCGGTCGC CGACGGCGTGCTGGAGGAACTGGCCGAAGCGCGCCGTCATATCGTCGGCAAGCCATGGCTGCAGGTCTGGCAGCCTGCGT TGCACCGCGTGTTCGCCAGTGTGGGCCTGCACGGCGATACGGTGATGGTGGCGATTACCGCGCTGCACGATACCTTGCAG GCGATTGCCGAAGCGCGCCCGGAACTGGAAAAAGCCCTGCCGGAGCTGCCGCAGGTCAACCTGCCGCCGCCGGCTGCCGA AAGCGTCAGCGTGGTGCTCGGTGCCGAAGCGGTGGCGCAGAGCATCGACAGCGCCGATGCCGAACGTTTCCGCGCGATGG ATATCGGCACCTGGCTGGATTTCGTCGACAAGGACGGCAAGGTGCAGGCGGGCAAACTGTCGTGGGTGAGCCCGATCTCG CAGCGTCTGCTGTTCGTTAATCGGCGCGGCGTGCGTTTTTGCGTCGCTTCACCGGAAGAATTGGCAGTGATGATGCGCCT GGGCCGCCTGCGCGAGCATATCCACGACGGCGCCTTCGACAGCGCGATGCAGGGTGTGATCGACCGGTTGGACCCGCTGC ACAACAACACGGTGCATTGA
Upstream 100 bases:
>100_bases TTGAACGAACCGCCTACCATGCGAAGGCGGAAGTTGGGGCCGTATCTGTTTTTCCTCGTATAAAAATTTTCACGCCTGCA GAGGCGGGGGGCCTTTGCGC
Downstream 100 bases:
>100_bases GCGCCCAACCCGCATGTGCAGCCGACAGGGCGCACGTTAGCGGTTGGCAAGCACGTTTTGCGCCGGAAGGCGTGGTCGGC ACCAACGGCGTGCGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGTSQLLFLDGMRELRRKCEEVASQFRQQL EDGWQALVLGTPLSADVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKPVLARVDRRLGWIAGGLELMADTNPI GPEHLGVAIHRAFATCDLAPEVRLLLIKLCERDLAEPIGRLYVRLDETLAKAGVVPEMSQAKRAPPRGDTPEERAQAQAQ GSAEMGGDEQGDQYAPAWSNRFLDRWAHSRGRMQAATQRGHADDGSAGGMDGETDHQGGSQGMLLEALQELLQQTRSVRD TAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDDESLAQRLKNEVLSSVTRLGVDPATAKLDPMDEDAID LVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNALAEACEGNNGDSAAERVLMGKVEEIV DRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELKQRVPEDAGLPNAVEDFLRQ PWLHHMTMAILRDGDEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDTVMVAITALHDTLQ AIAEARPELEKALPELPQVNLPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWVSPIS QRLLFVNRRGVRFCVASPEELAVMMRLGRLREHIHDGAFDSAMQGVIDRLDPLHNNTVH
Sequences:
>Translated_779_residues MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGTSQLLFLDGMRELRRKCEEVASQFRQQL EDGWQALVLGTPLSADVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKPVLARVDRRLGWIAGGLELMADTNPI GPEHLGVAIHRAFATCDLAPEVRLLLIKLCERDLAEPIGRLYVRLDETLAKAGVVPEMSQAKRAPPRGDTPEERAQAQAQ GSAEMGGDEQGDQYAPAWSNRFLDRWAHSRGRMQAATQRGHADDGSAGGMDGETDHQGGSQGMLLEALQELLQQTRSVRD TAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDDESLAQRLKNEVLSSVTRLGVDPATAKLDPMDEDAID LVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNALAEACEGNNGDSAAERVLMGKVEEIV DRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELKQRVPEDAGLPNAVEDFLRQ PWLHHMTMAILRDGDEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDTVMVAITALHDTLQ AIAEARPELEKALPELPQVNLPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWVSPIS QRLLFVNRRGVRFCVASPEELAVMMRLGRLREHIHDGAFDSAMQGVIDRLDPLHNNTVH >Mature_778_residues TFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGTSQLLFLDGMRELRRKCEEVASQFRQQLE DGWQALVLGTPLSADVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKPVLARVDRRLGWIAGGLELMADTNPIG PEHLGVAIHRAFATCDLAPEVRLLLIKLCERDLAEPIGRLYVRLDETLAKAGVVPEMSQAKRAPPRGDTPEERAQAQAQG SAEMGGDEQGDQYAPAWSNRFLDRWAHSRGRMQAATQRGHADDGSAGGMDGETDHQGGSQGMLLEALQELLQQTRSVRDT AASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDDESLAQRLKNEVLSSVTRLGVDPATAKLDPMDEDAIDL VGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNALAEACEGNNGDSAAERVLMGKVEEIVD RLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELKQRVPEDAGLPNAVEDFLRQP WLHHMTMAILRDGDEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDTVMVAITALHDTLQA IAEARPELEKALPELPQVNLPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWVSPISQ RLLFVNRRGVRFCVASPEELAVMMRLGRLREHIHDGAFDSAMQGVIDRLDPLHNNTVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85649; Mature: 85517
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGTSQLLFLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMRELRRKCEEVASQFRQQLEDGWQALVLGTPLSADVVLAGDMGTGPLSLVPEHVLESRL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AVRNLATVLLRDFKPVLARVDRRLGWIAGGLELMADTNPIGPEHLGVAIHRAFATCDLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH EVRLLLIKLCERDLAEPIGRLYVRLDETLAKAGVVPEMSQAKRAPPRGDTPEERAQAQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHC GSAEMGGDEQGDQYAPAWSNRFLDRWAHSRGRMQAATQRGHADDGSAGGMDGETDHQGGS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QGMLLEALQELLQQTRSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHEEHHC GDDDESLAQRLKNEVLSSVTRLGVDPATAKLDPMDEDAIDLVGMLFDVMLDERDLENRSR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH EMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNALAEACEGNNGDSAAERVLMGKVEEIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSEL HHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQRVPEDAGLPNAVEDFLRQPWLHHMTMAILRDGDEGPGTIEALAVADGVLEELAEARRH HHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVGKPWLQVWQPALHRVFASVGLHGDTVMVAITALHDTLQAIAEARPELEKALPELPQVN HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC LPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWVSPIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH QRLLFVNRRGVRFCVASPEELAVMMRLGRLREHIHDGAFDSAMQGVIDRLDPLHNNTVH HHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGTSQLLFLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMRELRRKCEEVASQFRQQLEDGWQALVLGTPLSADVVLAGDMGTGPLSLVPEHVLESRL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AVRNLATVLLRDFKPVLARVDRRLGWIAGGLELMADTNPIGPEHLGVAIHRAFATCDLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH EVRLLLIKLCERDLAEPIGRLYVRLDETLAKAGVVPEMSQAKRAPPRGDTPEERAQAQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHC GSAEMGGDEQGDQYAPAWSNRFLDRWAHSRGRMQAATQRGHADDGSAGGMDGETDHQGGS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QGMLLEALQELLQQTRSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHEEHHC GDDDESLAQRLKNEVLSSVTRLGVDPATAKLDPMDEDAIDLVGMLFDVMLDERDLENRSR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH EMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNALAEACEGNNGDSAAERVLMGKVEEIV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSEL HHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQRVPEDAGLPNAVEDFLRQPWLHHMTMAILRDGDEGPGTIEALAVADGVLEELAEARRH HHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVGKPWLQVWQPALHRVFASVGLHGDTVMVAITALHDTLQAIAEARPELEKALPELPQVN HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC LPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWVSPIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH QRLLFVNRRGVRFCVASPEELAVMMRLGRLREHIHDGAFDSAMQGVIDRLDPLHNNTVH HHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA