| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is pntAA [H]
Identifier: 84625092
GI number: 84625092
Start: 3892268
End: 3893365
Strand: Reverse
Name: pntAA [H]
Synonym: XOO_3435
Alternate gene names: 84625092
Gene position: 3893365-3892268 (Counterclockwise)
Preceding gene: 84625093
Following gene: 84625088
Centisome position: 78.81
GC content: 68.12
Gene sequence:
>1098_bases ATGGCTGTGCAGGTGCTGGTGCTGAAAGAACGGGCCGATGGCGAACGCCGTGTGGCCGCGACGCCGGAAACGGTCAAGAA ACTGGTCGCACGTGGTGCCAGCGTATGGATCGAGCCGGACGCCGGCCGTGCCAGCAGCATGGACAATGCGGTGTATCTGC AGGCCGGTGCGCAGCCCGCCGGCGCCGACGCCGTGGCACGGGCCGATGTGCTGCTCTGCGTGCAGGCGCCACTCACCCCA ACGCTGCTGCAGTGCAAACCGCACACGGTGGTGATCGGCATGCTGTCGCCGGACGCGGATCCGGCGCGCGCGCAGGCGTT TGCCGCGCGCGCTCTGATCGTGTTTCCACTGGAGCGCCTGCCGCGCACCACGCGTGCGCAATCGATGGATGTGTTGAGTT CGCAAGCCGGCATGGCCGGCTACAAGGCGGTGCTACTTGCCGCGCAACTGGCGCCGCGCTTTTTCCCGATGCTGACCACG GCGGCCGGCACCATGCGCCCGTGCAAGGTATTGGTGATCGGCGCGGGCGTGGCCGGTCTGCAGGCGATCGCCACCGCCAA ACGGCTCGGTGCGCAGGTGGAAGGCTTCGATGTGCGGCCGGAAACGCGTGAGCAGATCGCCTCGCTGGGCGCACGGTTCC TGGATCTGGGCGTGAGCGCGGCCGGCGAAGGAGGCTACGCGCGCCAGCTCACCGACGACGAACGTGCCGAACAGCAGCGC CGTCTGGCAGAGCATCTCAAGGGCGTGGATGTGGTGGTGTGCACCGCGGCGGTTCCAGTCCGGCCGGCGCCGAAGATCGT GACTGCCGAGATGGCGCGGGGCATGCGCGCCGGCAGCGTGATTGTGGATCTGGCGGCGGAAACCGGCGGCAATTGCGCGG CTACCCGCCCAGGCGAGACCTATGACCTCGACGGCGTAATGATCGCCGGCCCGCTCAATCTGGCCAGCCAGGGTGCCGTG CATGCCAGCGAGATGTTCGCGCGCAACGTGTACGCATTCGCTGCCTTGTTGATCAAGGACGGCGCGCTGCCCTTCGATTG GGACGATGAGTTGCTGGCGAAGACGCGGTGGTCGGCGCCGGCAGTGGCCACCAGCTAA
Upstream 100 bases:
>100_bases GGCAAGCACGTTTTGCGCCGGAAGGCGTGGTCGGCACCAACGGCGTGCGTGCCGCGCTCTGCTGGCATCGCCGCGACTGG GCGCAAGACCGGAGCAACGC
Downstream 100 bases:
>100_bases GCGACGTAGCAAGCGCATCGTGGGCAATCGGCCAAGCGCGATGCGCCGCGTACCGTGCGCAGCCGTCGAGCGGGTGCGGA TGATCTGCAAGTCGTCTGAT
Product: pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Pyridine nucleotide transhydrogenase subunit alpha 1 [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAVQVLVLKERADGERRVAATPETVKKLVARGASVWIEPDAGRASSMDNAVYLQAGAQPAGADAVARADVLLCVQAPLTP TLLQCKPHTVVIGMLSPDADPARAQAFAARALIVFPLERLPRTTRAQSMDVLSSQAGMAGYKAVLLAAQLAPRFFPMLTT AAGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLTDDERAEQQR RLAEHLKGVDVVVCTAAVPVRPAPKIVTAEMARGMRAGSVIVDLAAETGGNCAATRPGETYDLDGVMIAGPLNLASQGAV HASEMFARNVYAFAALLIKDGALPFDWDDELLAKTRWSAPAVATS
Sequences:
>Translated_365_residues MAVQVLVLKERADGERRVAATPETVKKLVARGASVWIEPDAGRASSMDNAVYLQAGAQPAGADAVARADVLLCVQAPLTP TLLQCKPHTVVIGMLSPDADPARAQAFAARALIVFPLERLPRTTRAQSMDVLSSQAGMAGYKAVLLAAQLAPRFFPMLTT AAGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLTDDERAEQQR RLAEHLKGVDVVVCTAAVPVRPAPKIVTAEMARGMRAGSVIVDLAAETGGNCAATRPGETYDLDGVMIAGPLNLASQGAV HASEMFARNVYAFAALLIKDGALPFDWDDELLAKTRWSAPAVATS >Mature_364_residues AVQVLVLKERADGERRVAATPETVKKLVARGASVWIEPDAGRASSMDNAVYLQAGAQPAGADAVARADVLLCVQAPLTPT LLQCKPHTVVIGMLSPDADPARAQAFAARALIVFPLERLPRTTRAQSMDVLSSQAGMAGYKAVLLAAQLAPRFFPMLTTA AGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLTDDERAEQQRR LAEHLKGVDVVVCTAAVPVRPAPKIVTAEMARGMRAGSVIVDLAAETGGNCAATRPGETYDLDGVMIAGPLNLASQGAVH ASEMFARNVYAFAALLIKDGALPFDWDDELLAKTRWSAPAVATS
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=352, Percent_Identity=39.2045454545455, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI122939153, Length=352, Percent_Identity=39.2045454545455, Blast_Score=228, Evalue=1e-59, Organism=Escherichia coli, GI1787887, Length=370, Percent_Identity=41.0810810810811, Blast_Score=271, Evalue=6e-74, Organism=Caenorhabditis elegans, GI17550456, Length=351, Percent_Identity=39.6011396011396, Blast_Score=248, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 38233; Mature: 38101
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQVLVLKERADGERRVAATPETVKKLVARGASVWIEPDAGRASSMDNAVYLQAGAQPA CEEEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCC GADAVARADVLLCVQAPLTPTLLQCKPHTVVIGMLSPDADPARAQAFAARALIVFPLERL CCHHHHHCEEEEEEECCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEHHHC PRTTRAQSMDVLSSQAGMAGYKAVLLAAQLAPRFFPMLTTAAGTMRPCKVLVIGAGVAGL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH QAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLTDDERAEQQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH RLAEHLKGVDVVVCTAAVPVRPAPKIVTAEMARGMRAGSVIVDLAAETGGNCAATRPGET HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCC YDLDGVMIAGPLNLASQGAVHASEMFARNVYAFAALLIKDGALPFDWDDELLAKTRWSAP EECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC AVATS CCCCC >Mature Secondary Structure AVQVLVLKERADGERRVAATPETVKKLVARGASVWIEPDAGRASSMDNAVYLQAGAQPA EEEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCC GADAVARADVLLCVQAPLTPTLLQCKPHTVVIGMLSPDADPARAQAFAARALIVFPLERL CCHHHHHCEEEEEEECCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEHHHC PRTTRAQSMDVLSSQAGMAGYKAVLLAAQLAPRFFPMLTTAAGTMRPCKVLVIGAGVAGL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH QAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLTDDERAEQQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH RLAEHLKGVDVVVCTAAVPVRPAPKIVTAEMARGMRAGSVIVDLAAETGGNCAATRPGET HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCC YDLDGVMIAGPLNLASQGAVHASEMFARNVYAFAALLIKDGALPFDWDDELLAKTRWSAP EECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC AVATS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893; 9335295; 8662004 [H]