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The map label for this gene is qseC [H]

Identifier: 84624997

GI number: 84624997

Start: 3800897

End: 3802189

Strand: Reverse

Name: qseC [H]

Synonym: XOO_3340

Alternate gene names: 84624997

Gene position: 3802189-3800897 (Counterclockwise)

Preceding gene: 84624998

Following gene: 84624991

Centisome position: 76.96

GC content: 64.89

Gene sequence:

>1293_bases
ATGTCTAAACAGCGCCCCTTGGGTCTCCGCGTGCTGGTGTGGTTGTTCGGCTACACGCTGTTGATGACGCTGGCGGTGTT
CGGCACTGCGCAGTACCTGCACGAACGCGCCGAACACGGCGTGTGGCGCTCGTTGCTGAATTCCGAGCTCGACAGCATTC
TCGAGCGCAGCGTGCAGAACCCGGATTACCACTGGCAGGACTCGGACACCTTGCGGCTGTATCACATCGACGACGTCGCG
CGCGCACCACCGGTCTTGCGCACCCTGCCTCCGGGCTTGCACGACGGCCTGGAAATCGCCGGCCGCCAGAGTGCAGTGAT
GGTGCGCGACACCGCGCATGCCGGCCGCCTGGCGCTGGTGCTGGACATCACCGATTTCGAAGCGCTGGAAAAATTCCTGA
CCCGCTGGATGCTGGCCGCGGGCATCGCGTTGATCGGCATCACCTTGCTGATGGGCACTTATGCGATGGCTCGGCTGGTG
CGCCCGCTGGTTGAACTGGCGCGCGATATCGGCGGCTTGCGTCCGGAGCAGCGCGCGCAGCAGATTGCGGTCGGGGCGCA
AGGCAGTGCCGAGCTGTACGTGATTGCCGATGCGCTCAACGATTATCTTGAGCGCAACAGCCAGTTCGTGGACCGCGAAC
GCGCCTTCATCGACAGCGCCAGCCACGAATTGCGCACGCCCATCGCAGTGATCGGCAATGCGGTGGAGTTGGCGCTGGAT
CAACCCGGCACGCCGCCGGCGGTACGCCATCAACTGCAGCGCATCGCGCAGACCAGTGCCTCGGTCGAACAGTTGATCAC
CTTGCTGCTGGTGCTGGCCAAGGACCCGGGCCGGCTCGTGCGCAGCGGCGATTCGTTGCGGCTGGACAAACTGCTGCCGG
ATATCGTGGCCGACCACACGCATCTGTGCGCCGACAAGGATCTGCAACTGGTCCTGGAGGAGCCGCTGCCGCCGTGCAGC
TTGGTCGCGCCGGTCGCCATCGTGCAGACCGCCATCGGTAACCTGCTGCGCAACGCCATCGAAAACAGTGATCGCGGCAT
CATCCGCATCTCGCTATCGGCGCCCGGTGTCGTCCGCATCGCTGACCCGGGCCACGGCATGACGCCGGAAGAGATCAGCG
CCATCTACATGCGTCTGGCACGCGGCAACGCACGCCAGGGCAGTGGCATCGGGCTGGAATTGATCGGGCGGTTATGCGAA
CACCTGGGCTGGCATCTGCAACTGGATTCCAACGCAGGGCAGGGCACGGTGGCGACGCTGGATCTGTCCGGCGCTACTGC
CACGGCTCGCTAA

Upstream 100 bases:

>100_bases
GGCCCGTTCGCAGAAAAACTGATCCACACCTTGCCGCGACTCGGCTACCGGCTGGCGCAGCTGTATGCGGCCGAGGCGCC
TGGCGCGGGCGACAGCAGCG

Downstream 100 bases:

>100_bases
AAGCGTCGATGAACCAACTGCGCTCGCTGCCTGGCCGCGGGCTTGGTGCTGCATGTAGCACGCGTCCACCAGGATTCTTG
CGCGCTTCATCCACGCATGC

Product: two-component system sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSKQRPLGLRVLVWLFGYTLLMTLAVFGTAQYLHERAEHGVWRSLLNSELDSILERSVQNPDYHWQDSDTLRLYHIDDVA
RAPPVLRTLPPGLHDGLEIAGRQSAVMVRDTAHAGRLALVLDITDFEALEKFLTRWMLAAGIALIGITLLMGTYAMARLV
RPLVELARDIGGLRPEQRAQQIAVGAQGSAELYVIADALNDYLERNSQFVDRERAFIDSASHELRTPIAVIGNAVELALD
QPGTPPAVRHQLQRIAQTSASVEQLITLLLVLAKDPGRLVRSGDSLRLDKLLPDIVADHTHLCADKDLQLVLEEPLPPCS
LVAPVAIVQTAIGNLLRNAIENSDRGIIRISLSAPGVVRIADPGHGMTPEEISAIYMRLARGNARQGSGIGLELIGRLCE
HLGWHLQLDSNAGQGTVATLDLSGATATAR

Sequences:

>Translated_430_residues
MSKQRPLGLRVLVWLFGYTLLMTLAVFGTAQYLHERAEHGVWRSLLNSELDSILERSVQNPDYHWQDSDTLRLYHIDDVA
RAPPVLRTLPPGLHDGLEIAGRQSAVMVRDTAHAGRLALVLDITDFEALEKFLTRWMLAAGIALIGITLLMGTYAMARLV
RPLVELARDIGGLRPEQRAQQIAVGAQGSAELYVIADALNDYLERNSQFVDRERAFIDSASHELRTPIAVIGNAVELALD
QPGTPPAVRHQLQRIAQTSASVEQLITLLLVLAKDPGRLVRSGDSLRLDKLLPDIVADHTHLCADKDLQLVLEEPLPPCS
LVAPVAIVQTAIGNLLRNAIENSDRGIIRISLSAPGVVRIADPGHGMTPEEISAIYMRLARGNARQGSGIGLELIGRLCE
HLGWHLQLDSNAGQGTVATLDLSGATATAR
>Mature_429_residues
SKQRPLGLRVLVWLFGYTLLMTLAVFGTAQYLHERAEHGVWRSLLNSELDSILERSVQNPDYHWQDSDTLRLYHIDDVAR
APPVLRTLPPGLHDGLEIAGRQSAVMVRDTAHAGRLALVLDITDFEALEKFLTRWMLAAGIALIGITLLMGTYAMARLVR
PLVELARDIGGLRPEQRAQQIAVGAQGSAELYVIADALNDYLERNSQFVDRERAFIDSASHELRTPIAVIGNAVELALDQ
PGTPPAVRHQLQRIAQTSASVEQLITLLLVLAKDPGRLVRSGDSLRLDKLLPDIVADHTHLCADKDLQLVLEEPLPPCSL
VAPVAIVQTAIGNLLRNAIENSDRGIIRISLSAPGVVRIADPGHGMTPEEISAIYMRLARGNARQGSGIGLELIGRLCEH
LGWHLQLDSNAGQGTVATLDLSGATATAR

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790551, Length=294, Percent_Identity=27.2108843537415, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789403, Length=289, Percent_Identity=28.0276816608997, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI145693157, Length=237, Percent_Identity=26.5822784810127, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788713, Length=237, Percent_Identity=25.7383966244726, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46898; Mature: 46767

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQRPLGLRVLVWLFGYTLLMTLAVFGTAQYLHERAEHGVWRSLLNSELDSILERSVQN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYHWQDSDTLRLYHIDDVARAPPVLRTLPPGLHDGLEIAGRQSAVMVRDTAHAGRLALV
CCCCCCCCCCEEEEEECHHHHCCCHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEE
LDITDFEALEKFLTRWMLAAGIALIGITLLMGTYAMARLVRPLVELARDIGGLRPEQRAQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QIAVGAQGSAELYVIADALNDYLERNSQFVDRERAFIDSASHELRTPIAVIGNAVELALD
HHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHEEEC
QPGTPPAVRHQLQRIAQTSASVEQLITLLLVLAKDPGRLVRSGDSLRLDKLLPDIVADHT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEHHHHHHHHHHCCH
HLCADKDLQLVLEEPLPPCSLVAPVAIVQTAIGNLLRNAIENSDRGIIRISLSAPGVVRI
HHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
ADPGHGMTPEEISAIYMRLARGNARQGSGIGLELIGRLCEHLGWHLQLDSNAGQGTVATL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEE
DLSGATATAR
EECCCCCCCC
>Mature Secondary Structure 
SKQRPLGLRVLVWLFGYTLLMTLAVFGTAQYLHERAEHGVWRSLLNSELDSILERSVQN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYHWQDSDTLRLYHIDDVARAPPVLRTLPPGLHDGLEIAGRQSAVMVRDTAHAGRLALV
CCCCCCCCCCEEEEEECHHHHCCCHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEE
LDITDFEALEKFLTRWMLAAGIALIGITLLMGTYAMARLVRPLVELARDIGGLRPEQRAQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QIAVGAQGSAELYVIADALNDYLERNSQFVDRERAFIDSASHELRTPIAVIGNAVELALD
HHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHEEEC
QPGTPPAVRHQLQRIAQTSASVEQLITLLLVLAKDPGRLVRSGDSLRLDKLLPDIVADHT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEHHHHHHHHHHCCH
HLCADKDLQLVLEEPLPPCSLVAPVAIVQTAIGNLLRNAIENSDRGIIRISLSAPGVVRI
HHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
ADPGHGMTPEEISAIYMRLARGNARQGSGIGLELIGRLCEHLGWHLQLDSNAGQGTVATL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEE
DLSGATATAR
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]