Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624975

Identifier: 84624975

GI number: 84624975

Start: 3780230

End: 3781213

Strand: Reverse

Name: 84624975

Synonym: XOO_3318

Alternate gene names: NA

Gene position: 3781213-3780230 (Counterclockwise)

Preceding gene: 84624976

Following gene: 84624974

Centisome position: 76.54

GC content: 65.75

Gene sequence:

>984_bases
ATGAGTCGCGAAGTCAGTGTAGGCGTCTCCTACTTCGGCAAGGTACCTTCCCGCGGCGATTTCGTGCGCGCGGCCGACAA
CCATCAACTGCTCGGCTGGCTCGACCGCTGGGCGGGTCTGAGCGTGGATCTGCTGAGCCAGAACCCGGACTGGAAGCGGC
TCTACGACGAAGCGCCCGACATCCACTACGCGTTCCTGGGCTCGCGCAGCAAGATGGTGCTGTGCGGGCATTTCCAGCCC
AGTCGCGATGCGTCGCAGCGCCGCTTCCCGTTGCTGTCGGCGGTCCGTCTGGAGGCCAGCGAGCCGCTGTCGTTCATCGC
CCGCAGTCCGCTTGCGATGTCCAAGGTCTGGTCCGGGCTGTCGCGGATGGCCAAGCAGGCGATGGTCGCGGACGATGCCG
GCCCGGCGCTCACCGCGCTCGCCGACACCCGCTACACGCTGAGCACCGACGCGTCGGCGTACAACGCCACCTTCAACGAC
TTCCTCGATATCCAGACGGTCGGCTCGATCGAGGCTTTGCTGCGCACGGCCGGCCATCCCGACGTGTCGTTGAAGAAACT
GCTGCCGGCACTGGGCCTGCTGCTGCAGCCGATCCTCGCCGGCGGCAACGTGTCGGTGGACAAGGCGCTGGAGCTTCCGC
TGGTGCAGGACGCGCTGTACCGGCCGCTGCTGGCCGCGTTCTGGCTGGACATCGTCGCCTGCTTCGTTGCGCGCGGCGAT
TTCGAACTGGCGGTGCTGATCCGCAACGATGCTGCACCGCGCATGCTGATCGGCTTCAACGGTGCCGACCACCAGGCGCT
GCGCGCAGCGCTGGACCCACGCGAGGCCGGTGATTTCCTGATCCGCGTCCAGGACGCCGATTGGGTCGAGGACTACATGC
ACAGCGATTACAACCTCAACAAGCTAGCCAGCTATCTGGATCGGGACGACCTGGCGTTGAAGACGGCCCGCAAGTTGTTC
GGCGAGACTTTCCTGGGGACATGA

Upstream 100 bases:

>100_bases
CGGTGGCCGGTAGCCCGACAACCGTCGGTGCCGATGCGCCAGCGGCCGCTGCGCCGCCCGGTTCGGTTCCGGCGGGTGCG
TCCGCACAAGAAGGTGGCCA

Downstream 100 bases:

>100_bases
ATATGCGACACCTGAGTGCCAAAACCCTCGCCCTGAGTGGCCTGATAACCGCGTTCGCCTCCTCCGCCCAGGTCGCCGCG
CCTGCCGCCACGCCTGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQP
SRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFND
FLDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD
FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLF
GETFLGT

Sequences:

>Translated_327_residues
MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQP
SRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFND
FLDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD
FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLF
GETFLGT
>Mature_326_residues
SREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQPS
RDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDF
LDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGDF
ELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLFG
ETFLGT

Specific function: Unknown

COG id: COG3913

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36044; Mature: 35912

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPD
CCCCEEECHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCC
IHYAFLGSRSKMVLCGHFQPSRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGL
EEEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH
SRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDFLDIQTVGSIEALLRTAGHP
HHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC
DVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLN
CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCHH
KLASYLDRDDLALKTARKLFGETFLGT
HHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPD
CCCEEECHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCC
IHYAFLGSRSKMVLCGHFQPSRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGL
EEEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH
SRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDFLDIQTVGSIEALLRTAGHP
HHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC
DVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLN
CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCHH
KLASYLDRDDLALKTARKLFGETFLGT
HHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA