| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624975
Identifier: 84624975
GI number: 84624975
Start: 3780230
End: 3781213
Strand: Reverse
Name: 84624975
Synonym: XOO_3318
Alternate gene names: NA
Gene position: 3781213-3780230 (Counterclockwise)
Preceding gene: 84624976
Following gene: 84624974
Centisome position: 76.54
GC content: 65.75
Gene sequence:
>984_bases ATGAGTCGCGAAGTCAGTGTAGGCGTCTCCTACTTCGGCAAGGTACCTTCCCGCGGCGATTTCGTGCGCGCGGCCGACAA CCATCAACTGCTCGGCTGGCTCGACCGCTGGGCGGGTCTGAGCGTGGATCTGCTGAGCCAGAACCCGGACTGGAAGCGGC TCTACGACGAAGCGCCCGACATCCACTACGCGTTCCTGGGCTCGCGCAGCAAGATGGTGCTGTGCGGGCATTTCCAGCCC AGTCGCGATGCGTCGCAGCGCCGCTTCCCGTTGCTGTCGGCGGTCCGTCTGGAGGCCAGCGAGCCGCTGTCGTTCATCGC CCGCAGTCCGCTTGCGATGTCCAAGGTCTGGTCCGGGCTGTCGCGGATGGCCAAGCAGGCGATGGTCGCGGACGATGCCG GCCCGGCGCTCACCGCGCTCGCCGACACCCGCTACACGCTGAGCACCGACGCGTCGGCGTACAACGCCACCTTCAACGAC TTCCTCGATATCCAGACGGTCGGCTCGATCGAGGCTTTGCTGCGCACGGCCGGCCATCCCGACGTGTCGTTGAAGAAACT GCTGCCGGCACTGGGCCTGCTGCTGCAGCCGATCCTCGCCGGCGGCAACGTGTCGGTGGACAAGGCGCTGGAGCTTCCGC TGGTGCAGGACGCGCTGTACCGGCCGCTGCTGGCCGCGTTCTGGCTGGACATCGTCGCCTGCTTCGTTGCGCGCGGCGAT TTCGAACTGGCGGTGCTGATCCGCAACGATGCTGCACCGCGCATGCTGATCGGCTTCAACGGTGCCGACCACCAGGCGCT GCGCGCAGCGCTGGACCCACGCGAGGCCGGTGATTTCCTGATCCGCGTCCAGGACGCCGATTGGGTCGAGGACTACATGC ACAGCGATTACAACCTCAACAAGCTAGCCAGCTATCTGGATCGGGACGACCTGGCGTTGAAGACGGCCCGCAAGTTGTTC GGCGAGACTTTCCTGGGGACATGA
Upstream 100 bases:
>100_bases CGGTGGCCGGTAGCCCGACAACCGTCGGTGCCGATGCGCCAGCGGCCGCTGCGCCGCCCGGTTCGGTTCCGGCGGGTGCG TCCGCACAAGAAGGTGGCCA
Downstream 100 bases:
>100_bases ATATGCGACACCTGAGTGCCAAAACCCTCGCCCTGAGTGGCCTGATAACCGCGTTCGCCTCCTCCGCCCAGGTCGCCGCG CCTGCCGCCACGCCTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQP SRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFND FLDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLF GETFLGT
Sequences:
>Translated_327_residues MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQP SRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFND FLDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLF GETFLGT >Mature_326_residues SREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPDIHYAFLGSRSKMVLCGHFQPS RDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGLSRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDF LDIQTVGSIEALLRTAGHPDVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGDF ELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLNKLASYLDRDDLALKTARKLFG ETFLGT
Specific function: Unknown
COG id: COG3913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36044; Mature: 35912
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPD CCCCEEECHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCC IHYAFLGSRSKMVLCGHFQPSRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGL EEEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH SRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDFLDIQTVGSIEALLRTAGHP HHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC DVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLN CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCHH KLASYLDRDDLALKTARKLFGETFLGT HHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SREVSVGVSYFGKVPSRGDFVRAADNHQLLGWLDRWAGLSVDLLSQNPDWKRLYDEAPD CCCEEECHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCC IHYAFLGSRSKMVLCGHFQPSRDASQRRFPLLSAVRLEASEPLSFIARSPLAMSKVWSGL EEEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH SRMAKQAMVADDAGPALTALADTRYTLSTDASAYNATFNDFLDIQTVGSIEALLRTAGHP HHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC DVSLKKLLPALGLLLQPILAGGNVSVDKALELPLVQDALYRPLLAAFWLDIVACFVARGD CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC FELAVLIRNDAAPRMLIGFNGADHQALRAALDPREAGDFLIRVQDADWVEDYMHSDYNLN CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCHH KLASYLDRDDLALKTARKLFGETFLGT HHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA