| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624963
Identifier: 84624963
GI number: 84624963
Start: 3766597
End: 3768948
Strand: Reverse
Name: 84624963
Synonym: XOO_3306
Alternate gene names: NA
Gene position: 3768948-3766597 (Counterclockwise)
Preceding gene: 84624964
Following gene: 84624961
Centisome position: 76.29
GC content: 62.93
Gene sequence:
>2352_bases ATGGCAACGCATGAGGCGGCAACGACTCCACTGCCCAGTTCCACGGCCGGCAGCAATGCTGACGAAGCGCCAGCAGCAAC GGGCGATTTCAGGCTCTGCTACAAGAATACCGCGGGCTTGCCGGTCCCCTGCGCGAATGTGCGCTACCAAGTGGTGCACG CGACAGGCGACATCGTGGCTAAAGGCAGCACTGGCCAAGACGGACGCACGCAGCGGATTTCCGTCAAGGCCACGCAGGCA ACGACCACGCCCGGATTCAGTTCGCCGTATCCGTTGTTCACCACGATGCACGACGGCATGGAGCGCTATACGTTGCAGGT ATGGAGCCAGGTGGTGTCTGCATACGTGGAGCCGGAATTGCATCCGGACCTAAAGCTGGCACCCAGGCTGGTCTTGCCGT CGGTCAGCGTCATCGCCCCGCCGATGCAGACCCAGGACGTGCTGTTGAAGCGCTATCTGCGCGTGCGCTTCCAGTTCAAG CAAGGCAATCAACCGATCGTCGGCGCGCCTTTTGTCGCCTACACCTACGATGCCGCCGGCCGGCAGATCGCCGCCAGGGA TCTGCAAGGCAAGCCGATCAAGGGCAATACCAATAAGCACGGCGATACCGGCAAGCTCTATACCAACGACACGGCCTGGT TCGTGTTCAACCTGCCTGGCGCGGAGAAAATGGCGTATACCTCCGATGCGTTCGAGCCGTGCGTGATGGGGGCGGACGCG GTGATGTACGAAGTGAATGTCAAAAGCCAGGTAGCCGTGGCTGCGCCCGGCAAGGGCACGGTCGCCAAGGTCTCGGGCAA GGTCAGCGCGCCTGCGGTGCTCAACGCGCAAGACGAGGAACTGTTGCTGTTGACGCCGGAGGTATGGAAGGAATTCGAGG CAGTCAGCGGTCATGTCGAAAGCACGTTCGCCGGTGTGCACCACGCGCGTTCCACGTTGGCGCAGGCGTTGCAAGGTCGC AGCCCGGAGGCGATCCGCCAGGCCGAGAAAGATCTGAACCTTGCCGAAGACAATGTCGCGACCATGTTGAACAAGGATTT TGCCAAGAAGGCGGACCTGGTCGAAGTGGTCACCTTCGAAAGCTACGACAAGGGCGGCGCTGCGGGCGATGGCAGCGTGC GCGATCGGATGGGATTGCGCAGGCGTTATCTGCCGCGCAAGAAGTACGAGGAGTACAAGCAGCGCCGGATCATGGGCGTG CCGACCCGGCTGGCGATGAGTGTCTCGGTCAAGGCCAAGCATGGCAATGCGGCGGCTGAGGTCGTCAAGGCACAAGGGCG AACATTCCGATCGCAAGGCGTTCGATGCGGCGAAGTTCAAGGAATCGTTGTCCAGGATCACCGCCACGGCCAAGTACAGC GGGAGCGTGCAGACCGATCCAGGGGTGTGGGACATGATCGACCTTGGGGGCAACCAGTTCAGCGAGACGGTCAAAAAGAG CGAAAGCTACTCGGTGGATACGGCCGCGCAATGGATGCGTTGCGCGGCCGGCGCAGGGGCCAGTTCGGAGCTGGGATGGG ACCCGAACAAGCAACGCTTCAAGGCGCAGGCCACGGCCAATGCGCAGGCCAAGCTGATCCTGTTCGAGGGCAAATGGGTG CATACGCTGAGCATTCCCAGCACAAAGGGCTGGCAGATGAACTTCGGCGGGATGGATCTGGGGGCGATCGTCTTCCAGCT AGCCTGCGAGCTGTACGGGTTCGTGGGCGCGAAGGCGTCGATGACCGGTGCGGTGGGCGTGTCGTACAGCGGCAACAAGG CGACGGTGCAGCCGCAGGCGCGCGACCGCACCGACAGCCTGGCGTCGAACTTCGACCAGACACACGGCTTGCCGCGCGCG GACCTGGGCGATCCGCCCGGCCCCAACGGCGCTGCGTCGCGGCGTGTGGTGCCGGCATCGTTGAACGAGACCGCGCCCAG CGATATGAACGGCATGAGCGTCAATGCCGAAGCGTTCGCCGGCGTGGAAGGCGGCCTGACGCCTGCCGGGGAACTGCACT GGTTGCCGCCGGAGCAGACCAAGCCGGTGGCCTTCGCCAGGCTGTCGCTGGATGTGGCGGTCAGCGCCGGTGCCGGTGCC AGCGCGCAACTCAACATCTACTACGCGCAGGGCAAGTTCCGGGTCAAGGCGAGCGCGCGCCTGTGCTGGGGCGTGGGCGC GAAGGGCGCAATCGACTTCGTGGTCGATGCCGAGGGCATGCTGGAGTTCGTCAAGTGGGTGTATTACCAGTTGGCGCATG CTGGGTTCAAGACGTTGGTGTATATGGCCAAGGATGCGTTCTTGGCGTTGTCGCAACTTTTGTTTATGGCGATTGCCAAG GATTCGGAGATTGGGCAGCAACTCGCCTCTAG
Upstream 100 bases:
>100_bases AATGCACAAGGCGAAACCGAACAAGTGATCACGGATGGTCCCGACAGCGTGCATCTGATGGTCTCCGACGAACGTCACGA AGGGTATTACAAGGTGTCCG
Downstream 100 bases:
>100_bases TGTAGGAAAAATTTCTGACTCGTTAGATTTGGTAATGAGTAGCCTCGAAAAGGCAGAAAACCGCCATAAACTCGTCAAAA GCATCAACAAGAAGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MATHEAATTPLPSSTAGSNADEAPAATGDFRLCYKNTAGLPVPCANVRYQVVHATGDIVAKGSTGQDGRTQRISVKATQA TTTPGFSSPYPLFTTMHDGMERYTLQVWSQVVSAYVEPELHPDLKLAPRLVLPSVSVIAPPMQTQDVLLKRYLRVRFQFK QGNQPIVGAPFVAYTYDAAGRQIAARDLQGKPIKGNTNKHGDTGKLYTNDTAWFVFNLPGAEKMAYTSDAFEPCVMGADA VMYEVNVKSQVAVAAPGKGTVAKVSGKVSAPAVLNAQDEELLLLTPEVWKEFEAVSGHVESTFAGVHHARSTLAQALQGR SPEAIRQAEKDLNLAEDNVATMLNKDFAKKADLVEVVTFESYDKGGAAGDGSVRDRMGLRRRYLPRKKYEEYKQRRIMGV PTRLAMSVSVKAKHGNAAAEVVKAQGRTFRSQGVRCGEVQGIVVQDHRHGQVQRERADRSRGVGHDRPWGQPVQRDGQKE RKLLGGYGRAMDALRGRRRGQFGAGMGPEQATLQGAGHGQCAGQADPVRGQMGAYAEHSQHKGLADELRRDGSGGDRLPA SLRAVRVRGREGVDDRCGGRVVQRQQGDGAAAGARPHRQPGVELRPDTRLAARGPGRSARPQRRCVAACGAGIVERDRAQ RYERHERQCRSVRRRGRRPDACRGTALVAAGADQAGGLRQAVAGCGGQRRCRCQRATQHLLRAGQVPGQGERAPVLGRGR EGRNRLRGRCRGHAGVRQVGVLPVGACWVQDVGVYGQGCVLGVVATFVYGDCQGFGDWAATRL
Sequences:
>Translated_783_residues MATHEAATTPLPSSTAGSNADEAPAATGDFRLCYKNTAGLPVPCANVRYQVVHATGDIVAKGSTGQDGRTQRISVKATQA TTTPGFSSPYPLFTTMHDGMERYTLQVWSQVVSAYVEPELHPDLKLAPRLVLPSVSVIAPPMQTQDVLLKRYLRVRFQFK QGNQPIVGAPFVAYTYDAAGRQIAARDLQGKPIKGNTNKHGDTGKLYTNDTAWFVFNLPGAEKMAYTSDAFEPCVMGADA VMYEVNVKSQVAVAAPGKGTVAKVSGKVSAPAVLNAQDEELLLLTPEVWKEFEAVSGHVESTFAGVHHARSTLAQALQGR SPEAIRQAEKDLNLAEDNVATMLNKDFAKKADLVEVVTFESYDKGGAAGDGSVRDRMGLRRRYLPRKKYEEYKQRRIMGV PTRLAMSVSVKAKHGNAAAEVVKAQGRTFRSQGVRCGEVQGIVVQDHRHGQVQRERADRSRGVGHDRPWGQPVQRDGQKE RKLLGGYGRAMDALRGRRRGQFGAGMGPEQATLQGAGHGQCAGQADPVRGQMGAYAEHSQHKGLADELRRDGSGGDRLPA SLRAVRVRGREGVDDRCGGRVVQRQQGDGAAAGARPHRQPGVELRPDTRLAARGPGRSARPQRRCVAACGAGIVERDRAQ RYERHERQCRSVRRRGRRPDACRGTALVAAGADQAGGLRQAVAGCGGQRRCRCQRATQHLLRAGQVPGQGERAPVLGRGR EGRNRLRGRCRGHAGVRQVGVLPVGACWVQDVGVYGQGCVLGVVATFVYGDCQGFGDWAATRL >Mature_782_residues ATHEAATTPLPSSTAGSNADEAPAATGDFRLCYKNTAGLPVPCANVRYQVVHATGDIVAKGSTGQDGRTQRISVKATQAT TTPGFSSPYPLFTTMHDGMERYTLQVWSQVVSAYVEPELHPDLKLAPRLVLPSVSVIAPPMQTQDVLLKRYLRVRFQFKQ GNQPIVGAPFVAYTYDAAGRQIAARDLQGKPIKGNTNKHGDTGKLYTNDTAWFVFNLPGAEKMAYTSDAFEPCVMGADAV MYEVNVKSQVAVAAPGKGTVAKVSGKVSAPAVLNAQDEELLLLTPEVWKEFEAVSGHVESTFAGVHHARSTLAQALQGRS PEAIRQAEKDLNLAEDNVATMLNKDFAKKADLVEVVTFESYDKGGAAGDGSVRDRMGLRRRYLPRKKYEEYKQRRIMGVP TRLAMSVSVKAKHGNAAAEVVKAQGRTFRSQGVRCGEVQGIVVQDHRHGQVQRERADRSRGVGHDRPWGQPVQRDGQKER KLLGGYGRAMDALRGRRRGQFGAGMGPEQATLQGAGHGQCAGQADPVRGQMGAYAEHSQHKGLADELRRDGSGGDRLPAS LRAVRVRGREGVDDRCGGRVVQRQQGDGAAAGARPHRQPGVELRPDTRLAARGPGRSARPQRRCVAACGAGIVERDRAQR YERHERQCRSVRRRGRRPDACRGTALVAAGADQAGGLRQAVAGCGGQRRCRCQRATQHLLRAGQVPGQGERAPVLGRGRE GRNRLRGRCRGHAGVRQVGVLPVGACWVQDVGVYGQGCVLGVVATFVYGDCQGFGDWAATRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84539; Mature: 84408
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHEAATTPLPSSTAGSNADEAPAATGDFRLCYKNTAGLPVPCANVRYQVVHATGDIVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEE KGSTGQDGRTQRISVKATQATTTPGFSSPYPLFTTMHDGMERYTLQVWSQVVSAYVEPEL CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HPDLKLAPRLVLPSVSVIAPPMQTQDVLLKRYLRVRFQFKQGNQPIVGAPFVAYTYDAAG CCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECCCHHEEEECCCC RQIAARDLQGKPIKGNTNKHGDTGKLYTNDTAWFVFNLPGAEKMAYTSDAFEPCVMGADA CEEHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHEECCCCCCHHHCCCCE VMYEVNVKSQVAVAAPGKGTVAKVSGKVSAPAVLNAQDEELLLLTPEVWKEFEAVSGHVE EEEEECCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCCEEEECHHHHHHHHHHCCHHH STFAGVHHARSTLAQALQGRSPEAIRQAEKDLNLAEDNVATMLNKDFAKKADLVEVVTFE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEC SYDKGGAAGDGSVRDRMGLRRRYLPRKKYEEYKQRRIMGVPTRLAMSVSVKAKHGNAAAE CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHH VVKAQGRTFRSQGVRCGEVQGIVVQDHRHGQVQRERADRSRGVGHDRPWGQPVQRDGQKE HHHHCCCHHHHCCCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHH RKLLGGYGRAMDALRGRRRGQFGAGMGPEQATLQGAGHGQCAGQADPVRGQMGAYAEHSQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH HKGLADELRRDGSGGDRLPASLRAVRVRGREGVDDRCGGRVVQRQQGDGAAAGARPHRQP CCCCHHHHHCCCCCCCCCCHHHHHHEECCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCC GVELRPDTRLAARGPGRSARPQRRCVAACGAGIVERDRAQRYERHERQCRSVRRRGRRPD CCEECCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ACRGTALVAAGADQAGGLRQAVAGCGGQRRCRCQRATQHLLRAGQVPGQGERAPVLGRGR CCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EGRNRLRGRCRGHAGVRQVGVLPVGACWVQDVGVYGQGCVLGVVATFVYGDCQGFGDWAA CHHHHHHHHHCCCCCCHHCCCEEECHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH TRL CCC >Mature Secondary Structure ATHEAATTPLPSSTAGSNADEAPAATGDFRLCYKNTAGLPVPCANVRYQVVHATGDIVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEE KGSTGQDGRTQRISVKATQATTTPGFSSPYPLFTTMHDGMERYTLQVWSQVVSAYVEPEL CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HPDLKLAPRLVLPSVSVIAPPMQTQDVLLKRYLRVRFQFKQGNQPIVGAPFVAYTYDAAG CCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECCCHHEEEECCCC RQIAARDLQGKPIKGNTNKHGDTGKLYTNDTAWFVFNLPGAEKMAYTSDAFEPCVMGADA CEEHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHEECCCCCCHHHCCCCE VMYEVNVKSQVAVAAPGKGTVAKVSGKVSAPAVLNAQDEELLLLTPEVWKEFEAVSGHVE EEEEECCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCCEEEECHHHHHHHHHHCCHHH STFAGVHHARSTLAQALQGRSPEAIRQAEKDLNLAEDNVATMLNKDFAKKADLVEVVTFE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEC SYDKGGAAGDGSVRDRMGLRRRYLPRKKYEEYKQRRIMGVPTRLAMSVSVKAKHGNAAAE CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHH VVKAQGRTFRSQGVRCGEVQGIVVQDHRHGQVQRERADRSRGVGHDRPWGQPVQRDGQKE HHHHCCCHHHHCCCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHH RKLLGGYGRAMDALRGRRRGQFGAGMGPEQATLQGAGHGQCAGQADPVRGQMGAYAEHSQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH HKGLADELRRDGSGGDRLPASLRAVRVRGREGVDDRCGGRVVQRQQGDGAAAGARPHRQP CCCCHHHHHCCCCCCCCCCHHHHHHEECCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCC GVELRPDTRLAARGPGRSARPQRRCVAACGAGIVERDRAQRYERHERQCRSVRRRGRRPD CCEECCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ACRGTALVAAGADQAGGLRQAVAGCGGQRRCRCQRATQHLLRAGQVPGQGERAPVLGRGR CCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EGRNRLRGRCRGHAGVRQVGVLPVGACWVQDVGVYGQGCVLGVVATFVYGDCQGFGDWAA CHHHHHHHHHCCCCCCHHCCCEEECHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH TRL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA