Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is imuB [H]

Identifier: 84624897

GI number: 84624897

Start: 3682866

End: 3684284

Strand: Reverse

Name: imuB [H]

Synonym: XOO_3240

Alternate gene names: 84624897

Gene position: 3684284-3682866 (Counterclockwise)

Preceding gene: 84624898

Following gene: 84624896

Centisome position: 74.58

GC content: 68.71

Gene sequence:

>1419_bases
ATGTTGTGGGCCTGCGTATTGCTGCCGCAGCTGGCGCTGGACGCTGTCCTTCGGCGTCTGGAAGAGCCGCAGGCGCCGCT
GGTGCTGTTGGAGGGTCCGGCGCAGTTACGCAGCCTGCATTCGGTCAATGCCGCGGCTGGCGCGGCCGGGTTAAAGGCCG
GCATGCGGCTGTCGGCGGCGCATGCGTTGATGACGCAGGTGCGCACCATCGATTACGACGCGCAGCACGAAGCGCGCACG
CAGCGGTTTCTTGCGGCCTGGGCGTATCGGCATAGTTCGCTGGTCAGCCAGCAGTGGTCGCGCGCCATCGTGCTGGAAGC
CGGTGCCAGCTTTCGCTTGTTCGGCCCTTGGCCACGCTTCGAGCGCCGCCTGCGCGATGAGCTGCAGGCCTTGGGTTTCC
AGCACCGGCTTGCGCTGGCACCCACGCCGCGTGCTGCGCGCGTGCTGGCTGGCCTGCGCGATGGCATGGTGGTCACACAG
TTGCCGGCGCTGCACAGCACGCTCGACAACGTGCCGGTGCGTCGCGCCGCATTGCCCGACGATGCCGGCGCGCGCCTGCA
ACACATGGGTGTGCGCACGCTGGCAGCGGTGCGCGCCCTGCCGCGTGACGGGTTGCGCCGGCGCTTCGGTGCGGGCCTGC
TCGATCATCTGGATCGCCTCTACGGGCAGGTCGACGACCCACTGGAGTGCTACGCGCCGCCAGACCATTTCGACCACCGC
GTGGAGCTGGGCTATGAGGTGGAAACGCATCCGGCGCTGCTGTTTCCGTTGCGCCGGCTGATGGGTGACTTATGTACGTA
TCTGTCCATTCGCGATGGTGGCGTACAGCGGTTTTTACTGCGCCTGGAACACGAAGAAGGCGCAACCGATGTGGAGATCG
GCCTGCTGACGCCGGAACGTGCGCCCACGTTGCTATTGGAGCTGGCGCGCAATCGGCTGGAGCGGGTGGAGATCCCACGG
CCGGTGGTGGCGATGCGCCTGCTGGCACGGCAACTGCCACCGTTCGTACCGGCCATGCGCGACCTGTTCGATCAACGCGC
ACAACAAACGGTGGAGTGGCCGCAACTGCGCGAGCGCCTGCGTGCGCGGCTTGGCGATGACGCGGTGTATCGCGTCCTGC
CGGCCGACGACCCGCGCCCGGAACGCGCCTGGCGTCGCGCCATCGGCGATGCGGTGCGCGAAGCCGCCGCGCCGCCACGT
CCGCCGCGCCCCACTTGGCTGTTGCCGCAGCCGGTGCCCCTGCACGACCCACACCTGCGCATCGTGTCCGGCCCGGAACG
GCTGGAAAGCGGCTGGTGGGACGATGACGAGGCGCGTCGCGACTACTACGTGGTGGAGACCGCGCGCGGCCGCCGCGGCT
GGGCCTTTGCCGCGCCTGGCCGATTGGATGGCTGGATGCTGCATGGGTGGTTTGCGTGA

Upstream 100 bases:

>100_bases
GCTGGAATTCCTGCCCGAGCGCGATGCCTGGCAAGTGCGCAAATGCCGCGGCGGGCAGGTGCCGTCGCAGCCGTTGCGGC
TGGCGCATTGAGGCGCGCGC

Downstream 100 bases:

>100_bases
TCGCTCGCATGCCTGGACGGTCTCCACGCATGGGCTACATGGCGGCTCGTCGCAGCTTGGGCGCGCGCTGCAGATATCGG
GTCTGCAGGCCAAACGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MLWACVLLPQLALDAVLRRLEEPQAPLVLLEGPAQLRSLHSVNAAAGAAGLKAGMRLSAAHALMTQVRTIDYDAQHEART
QRFLAAWAYRHSSLVSQQWSRAIVLEAGASFRLFGPWPRFERRLRDELQALGFQHRLALAPTPRAARVLAGLRDGMVVTQ
LPALHSTLDNVPVRRAALPDDAGARLQHMGVRTLAAVRALPRDGLRRRFGAGLLDHLDRLYGQVDDPLECYAPPDHFDHR
VELGYEVETHPALLFPLRRLMGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPERAPTLLLELARNRLERVEIPR
PVVAMRLLARQLPPFVPAMRDLFDQRAQQTVEWPQLRERLRARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPR
PPRPTWLLPQPVPLHDPHLRIVSGPERLESGWWDDDEARRDYYVVETARGRRGWAFAAPGRLDGWMLHGWFA

Sequences:

>Translated_472_residues
MLWACVLLPQLALDAVLRRLEEPQAPLVLLEGPAQLRSLHSVNAAAGAAGLKAGMRLSAAHALMTQVRTIDYDAQHEART
QRFLAAWAYRHSSLVSQQWSRAIVLEAGASFRLFGPWPRFERRLRDELQALGFQHRLALAPTPRAARVLAGLRDGMVVTQ
LPALHSTLDNVPVRRAALPDDAGARLQHMGVRTLAAVRALPRDGLRRRFGAGLLDHLDRLYGQVDDPLECYAPPDHFDHR
VELGYEVETHPALLFPLRRLMGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPERAPTLLLELARNRLERVEIPR
PVVAMRLLARQLPPFVPAMRDLFDQRAQQTVEWPQLRERLRARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPR
PPRPTWLLPQPVPLHDPHLRIVSGPERLESGWWDDDEARRDYYVVETARGRRGWAFAAPGRLDGWMLHGWFA
>Mature_472_residues
MLWACVLLPQLALDAVLRRLEEPQAPLVLLEGPAQLRSLHSVNAAAGAAGLKAGMRLSAAHALMTQVRTIDYDAQHEART
QRFLAAWAYRHSSLVSQQWSRAIVLEAGASFRLFGPWPRFERRLRDELQALGFQHRLALAPTPRAARVLAGLRDGMVVTQ
LPALHSTLDNVPVRRAALPDDAGARLQHMGVRTLAAVRALPRDGLRRRFGAGLLDHLDRLYGQVDDPLECYAPPDHFDHR
VELGYEVETHPALLFPLRRLMGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPERAPTLLLELARNRLERVEIPR
PVVAMRLLARQLPPFVPAMRDLFDQRAQQTVEWPQLRERLRARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPR
PPRPTWLLPQPVPLHDPHLRIVSGPERLESGWWDDDEARRDYYVVETARGRRGWAFAAPGRLDGWMLHGWFA

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 53405; Mature: 53405

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWACVLLPQLALDAVLRRLEEPQAPLVLLEGPAQLRSLHSVNAAAGAAGLKAGMRLSAA
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HALMTQVRTIDYDAQHEARTQRFLAAWAYRHSSLVSQQWSRAIVLEAGASFRLFGPWPRF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCHHH
ERRLRDELQALGFQHRLALAPTPRAARVLAGLRDGMVVTQLPALHSTLDNVPVRRAALPD
HHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCC
DAGARLQHMGVRTLAAVRALPRDGLRRRFGAGLLDHLDRLYGQVDDPLECYAPPDHFDHR
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
VELGYEVETHPALLFPLRRLMGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPER
EEECEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
APTLLLELARNRLERVEIPRPVVAMRLLARQLPPFVPAMRDLFDQRAQQTVEWPQLRERL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPRPPRPTWLLPQPVPLHDPHLR
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEE
IVSGPERLESGWWDDDEARRDYYVVETARGRRGWAFAAPGRLDGWMLHGWFA
EECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCC
>Mature Secondary Structure
MLWACVLLPQLALDAVLRRLEEPQAPLVLLEGPAQLRSLHSVNAAAGAAGLKAGMRLSAA
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HALMTQVRTIDYDAQHEARTQRFLAAWAYRHSSLVSQQWSRAIVLEAGASFRLFGPWPRF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCHHH
ERRLRDELQALGFQHRLALAPTPRAARVLAGLRDGMVVTQLPALHSTLDNVPVRRAALPD
HHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCC
DAGARLQHMGVRTLAAVRALPRDGLRRRFGAGLLDHLDRLYGQVDDPLECYAPPDHFDHR
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
VELGYEVETHPALLFPLRRLMGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPER
EEECEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
APTLLLELARNRLERVEIPRPVVAMRLLARQLPPFVPAMRDLFDQRAQQTVEWPQLRERL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPRPPRPTWLLPQPVPLHDPHLR
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEE
IVSGPERLESGWWDDDEARRDYYVVETARGRRGWAFAAPGRLDGWMLHGWFA
EECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA