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The map label for this gene is rlpB [C]

Identifier: 84624798

GI number: 84624798

Start: 3562112

End: 3562747

Strand: Reverse

Name: rlpB [C]

Synonym: XOO_3141

Alternate gene names: 84624798

Gene position: 3562747-3562112 (Counterclockwise)

Preceding gene: 84624799

Following gene: 84624797

Centisome position: 72.12

GC content: 66.51

Gene sequence:

>636_bases
ATGATTCGATTTCCTACTGCCTTCGCTGCCTCACTCGTGCTCGTCTCGAGCCTCACCGCCTGCGGTTTCCATCTGCGTAA
TTCGCTGGCGTTGCCGCCCGACACGCCGGCGGTGAAGGTGCAGTCCGCCGTGCAGTACAGCGAGCTGGCCAAGCTGTTGC
GGCGGGGCCTCAAGGCTTCCGGCGCCACGCTGGCCGATGAAGACGCCAAGACCGGCTTCGCACAGGTGCAGGTGTTGTCC
GAGCGCTGGGGCGATCTGCCGATCGCCATCGACAGCCAGGGCCGTGCCCAGGAATACAGCCTGCGCTACGCAGCCATTTT
CACTGTCACCACCGCCAATGGCGCGGTGCTGGTGCCGCAGCAGGTGATCGAGCTGTCGCGCGACTACGTGTCGCCGCCGG
TGGACGCCACCGGTACCGCGACCGAGCGCGAGATCCTTGCCGACGAACTGCGCAAAGACATGTCGGCCTCGATCCTGCGC
CGTATCGACAGCGTGGTACGTGCACGTTTGAAGCATGGCGAAAGCCTGGAAAGCACCCCGACTGCGCCCTTGCCGCCGGC
CCCGGTGCAGCCCACAACACCGCCCGAATCCAGCGTGCCGGCTGCGCTGCCGCCCGCGCCGACCTCGGGCAACTAA

Upstream 100 bases:

>100_bases
CGCCGCGGTGTACTGCGGCGCCTCTCAAGCCCCGTTCACGCGGTGTCGGGCAGGCTAGCCGCCTGTTGCCGCCGCCGGGG
CGCTCATCCAGACTGTGCCC

Downstream 100 bases:

>100_bases
GCCGCGCCCGCTCTTTTCCGCTATGGAACTTCGCCCCGAGCAACTGGCCGGCCAGTCCAACCAGCCGTTGCAGCCAGTCT
ATCTGATCGCCGGCCCGGAG

Product: lipoprotein

Products: NA

Alternate protein names: Rare Lipoprotein B Family; Lipoprotein; Rare Lipoprotein B Family Protein; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSAVQYSELAKLLRRGLKASGATLADEDAKTGFAQVQVLS
ERWGDLPIAIDSQGRAQEYSLRYAAIFTVTTANGAVLVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARLKHGESLESTPTAPLPPAPVQPTTPPESSVPAALPPAPTSGN

Sequences:

>Translated_211_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSAVQYSELAKLLRRGLKASGATLADEDAKTGFAQVQVLS
ERWGDLPIAIDSQGRAQEYSLRYAAIFTVTTANGAVLVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARLKHGESLESTPTAPLPPAPVQPTTPPESSVPAALPPAPTSGN
>Mature_211_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSAVQYSELAKLLRRGLKASGATLADEDAKTGFAQVQVLS
ERWGDLPIAIDSQGRAQEYSLRYAAIFTVTTANGAVLVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARLKHGESLESTPTAPLPPAPVQPTTPPESSVPAALPPAPTSGN

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22382; Mature: 22382

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSAVQYSELAKLLRRGLKAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GATLADEDAKTGFAQVQVLSERWGDLPIAIDSQGRAQEYSLRYAAIFTVTTANGAVLVPQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHEEEEEEEEEEECCCEEECHH
QVIELSRDYVSPPVDATGTATEREILADELRKDMSASILRRIDSVVRARLKHGESLESTP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAPLPPAPVQPTTPPESSVPAALPPAPTSGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSAVQYSELAKLLRRGLKAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GATLADEDAKTGFAQVQVLSERWGDLPIAIDSQGRAQEYSLRYAAIFTVTTANGAVLVPQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHEEEEEEEEEEECCCEEECHH
QVIELSRDYVSPPVDATGTATEREILADELRKDMSASILRRIDSVVRARLKHGESLESTP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAPLPPAPVQPTTPPESSVPAALPPAPTSGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA