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The map label for this gene is ybeB [H]

Identifier: 84624795

GI number: 84624795

Start: 3559692

End: 3560108

Strand: Reverse

Name: ybeB [H]

Synonym: XOO_3138

Alternate gene names: 84624795

Gene position: 3560108-3559692 (Counterclockwise)

Preceding gene: 84624796

Following gene: 84624794

Centisome position: 72.06

GC content: 64.03

Gene sequence:

>417_bases
TTGACCAGCCAAGCCCAAGTCATCAAGACCTCCCTTCCGAACCCGCCACCGTCCGTGCCGGCCCTGTTGGCCACCGTGCG
CGAGGCTGTCGAAGAACTGAAAGCCAAGGACGTGGTCGAGATCGATGTGCGCGGCAAGTCCAGTGTCTGCGACTACATGG
TGGTGGTCTCGGGTACCTCGACCCGCCATGTCAAATCGATCGCCGACGAAGTGGTCAAGTTCGCCAAGCGTCTGGAGGTG
ATGCCGCTGGGCGTGGAAGGCGAGCGCGAAGCCGAATGGGTGCTGGTCGACCTGGGCGATGTGGTCGTGCATGTGATGCT
GCCGCGCGTGCGCGAGTTCTATGCGCTGGAGCGCCTGTGGACCGTGGGCGACCAGCGTCCGTCCGATACGGACGAGTCCG
GCGCGGACGAAGACTGA

Upstream 100 bases:

>100_bases
TTCAGCGCGAAGGCCTGTACCGCAGCGCCTGCCCGGCTAGCTGAACACGCGTCCGGCCGGACCGGCCTATAATTCACGCC
AATTCCATCGAGTTGCCGCT

Downstream 100 bases:

>100_bases
GAGCGCTTGGCATGCCGAAAAAAACTCGCGAATTGCCAGTTGCACCCGATTCACGGGTATTGCAGCAACTGCGTGGCCAG
CCAGCGCAGGAAAACGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLEV
MPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDTDESGADED

Sequences:

>Translated_138_residues
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLEV
MPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDTDESGADED
>Mature_137_residues
TSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLEVM
PLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDTDESGADED

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=92, Percent_Identity=43.4782608695652, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI87081768, Length=102, Percent_Identity=50, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 15217; Mature: 15086

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTS
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCC
TRHVKSIADEVVKFAKRLEVMPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
TVGDQRPSDTDESGADED
HCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTS
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCC
TRHVKSIADEVVKFAKRLEVMPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
TVGDQRPSDTDESGADED
HCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]