| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624794
Identifier: 84624794
GI number: 84624794
Start: 3558565
End: 3559680
Strand: Reverse
Name: 84624794
Synonym: XOO_3137
Alternate gene names: NA
Gene position: 3559680-3558565 (Counterclockwise)
Preceding gene: 84624795
Following gene: 84624792
Centisome position: 72.06
GC content: 61.65
Gene sequence:
>1116_bases ATGCCGAAAAAAACTCGCGAATTGCCAGTTGCACCCGATTCACGGGTATTGCAGCAACTGCGTGGCCAGCCAGCGCAGGA AAACGGCCCGCCGCTATCGCCGGCGCGCAAACGCTTCGACCGGCTGCTGCACGATCTGCAGCGCCACCGCTCCGAATTGG AGGCCTGGCAGCATGCGCTCGCCCAGTGGCGCGAGCGCTACTTCGCCGAATTGCAGCCCTTGTTCGACCTTCGCTGTGCG GCCGACATCGCCTTGGTCGAAGAACTCGATCGCGCGTCTGTCGCGGTCAAACTGGGCAAGGCCGACCGGCAATTTTTGTC CGATCTGGTGTGCGATATCGCCGGCCCGTTGATCGAAGCAGGGCACGAAGCGCTACGGCCGATTTACGATCGCCATAGCG CGGTGAGCTACGAACAGGAAGTGTCCGAATCCGACGCCTTGATGAAGCAGATTCTTGGCGAAGCCTGTGGGCTGGATGCC GACGAACTGGATGGCATCGAGTCGCCTGAGGAACTCTACGAACGCGTCAGCGAGCGCTTGCAGCAGGAGCACGTGCAGCA ACAGCAACGCCAGACGCAACGGCGCAAGCGCGCCGAAAAGAAAACGGTTGCCGGCAGTGCCGAACCGCCCCCGTTGCGCG AGCTCTATCGCAAGCTGGCCGGCAATCTGCACCCCGACCGCGCCACGGACAGCGACGACCACGCATCGCGTACCCTGCTG ATGCAGCGGCTCAACGCCGCCTACAAGGCCGGCGATCTGCTGGGCCTGCTCGAATTGCAGGCAGAAATCGGCTTGCTGGA CGCACAAGGCGTGGATGCGATGAGCCCGGCGCGACTGAAGGACTACAACCGCGAACTGGAGCGGCAGTGCAAGGATCTGC AACAGCAGGTGCTGCAGCAGGCATATGACTTCTGCGCCCAGTATGGACTGGATCTGCCGTCGCGCCCCAAGCCTGAGCGG TTGAGCAGGTTGATGGGCCAACTCAAGCGTGATGTTGAAGACGATCTGATCGAAGCCCGCCAAAGCCTGAGTGAACTCTC CGACCCAAAATCGTTCAAGCGTTGGCTGAAGATGCAACGCGTCATGTCGGACATGCCAGACGCTCCGTGGTTCTGA
Upstream 100 bases:
>100_bases TGCGCGAGTTCTATGCGCTGGAGCGCCTGTGGACCGTGGGCGACCAGCGTCCGTCCGATACGGACGAGTCCGGCGCGGAC GAAGACTGAGAGCGCTTGGC
Downstream 100 bases:
>100_bases GGCGCGCTACTGGCGTTAGGCGATGTGCGCTTTGAGGCCGACAGTGCCGTGTATCACTCACATCTCGATCTCGTCCGCGG GTGGCGCTGCGATCACCCGC
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ N-Terminal Domain-Containing Protein; DNAJ Domain Protein; DNAJ-Class Molecular Chaperone; DNAJ-Class Molecular Chaperone Protein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPKKTRELPVAPDSRVLQQLRGQPAQENGPPLSPARKRFDRLLHDLQRHRSELEAWQHALAQWRERYFAELQPLFDLRCA ADIALVEELDRASVAVKLGKADRQFLSDLVCDIAGPLIEAGHEALRPIYDRHSAVSYEQEVSESDALMKQILGEACGLDA DELDGIESPEELYERVSERLQQEHVQQQQRQTQRRKRAEKKTVAGSAEPPPLRELYRKLAGNLHPDRATDSDDHASRTLL MQRLNAAYKAGDLLGLLELQAEIGLLDAQGVDAMSPARLKDYNRELERQCKDLQQQVLQQAYDFCAQYGLDLPSRPKPER LSRLMGQLKRDVEDDLIEARQSLSELSDPKSFKRWLKMQRVMSDMPDAPWF
Sequences:
>Translated_371_residues MPKKTRELPVAPDSRVLQQLRGQPAQENGPPLSPARKRFDRLLHDLQRHRSELEAWQHALAQWRERYFAELQPLFDLRCA ADIALVEELDRASVAVKLGKADRQFLSDLVCDIAGPLIEAGHEALRPIYDRHSAVSYEQEVSESDALMKQILGEACGLDA DELDGIESPEELYERVSERLQQEHVQQQQRQTQRRKRAEKKTVAGSAEPPPLRELYRKLAGNLHPDRATDSDDHASRTLL MQRLNAAYKAGDLLGLLELQAEIGLLDAQGVDAMSPARLKDYNRELERQCKDLQQQVLQQAYDFCAQYGLDLPSRPKPER LSRLMGQLKRDVEDDLIEARQSLSELSDPKSFKRWLKMQRVMSDMPDAPWF >Mature_370_residues PKKTRELPVAPDSRVLQQLRGQPAQENGPPLSPARKRFDRLLHDLQRHRSELEAWQHALAQWRERYFAELQPLFDLRCAA DIALVEELDRASVAVKLGKADRQFLSDLVCDIAGPLIEAGHEALRPIYDRHSAVSYEQEVSESDALMKQILGEACGLDAD ELDGIESPEELYERVSERLQQEHVQQQQRQTQRRKRAEKKTVAGSAEPPPLRELYRKLAGNLHPDRATDSDDHASRTLLM QRLNAAYKAGDLLGLLELQAEIGLLDAQGVDAMSPARLKDYNRELERQCKDLQQQVLQQAYDFCAQYGLDLPSRPKPERL SRLMGQLKRDVEDDLIEARQSLSELSDPKSFKRWLKMQRVMSDMPDAPWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42488; Mature: 42356
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKTRELPVAPDSRVLQQLRGQPAQENGPPLSPARKRFDRLLHDLQRHRSELEAWQHAL CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQWRERYFAELQPLFDLRCAADIALVEELDRASVAVKLGKADRQFLSDLVCDIAGPLIEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHEALRPIYDRHSAVSYEQEVSESDALMKQILGEACGLDADELDGIESPEELYERVSERL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QQEHVQQQQRQTQRRKRAEKKTVAGSAEPPPLRELYRKLAGNLHPDRATDSDDHASRTLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH MQRLNAAYKAGDLLGLLELQAEIGLLDAQGVDAMSPARLKDYNRELERQCKDLQQQVLQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYDFCAQYGLDLPSRPKPERLSRLMGQLKRDVEDDLIEARQSLSELSDPKSFKRWLKMQR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VMSDMPDAPWF HHHCCCCCCCC >Mature Secondary Structure PKKTRELPVAPDSRVLQQLRGQPAQENGPPLSPARKRFDRLLHDLQRHRSELEAWQHAL CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQWRERYFAELQPLFDLRCAADIALVEELDRASVAVKLGKADRQFLSDLVCDIAGPLIEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHEALRPIYDRHSAVSYEQEVSESDALMKQILGEACGLDADELDGIESPEELYERVSERL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QQEHVQQQQRQTQRRKRAEKKTVAGSAEPPPLRELYRKLAGNLHPDRATDSDDHASRTLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH MQRLNAAYKAGDLLGLLELQAEIGLLDAQGVDAMSPARLKDYNRELERQCKDLQQQVLQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AYDFCAQYGLDLPSRPKPERLSRLMGQLKRDVEDDLIEARQSLSELSDPKSFKRWLKMQR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VMSDMPDAPWF HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA