| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624600
Identifier: 84624600
GI number: 84624600
Start: 3328420
End: 3329118
Strand: Direct
Name: 84624600
Synonym: XOO_2943
Alternate gene names: NA
Gene position: 3328420-3329118 (Clockwise)
Preceding gene: 84624599
Following gene: 84624604
Centisome position: 67.37
GC content: 61.8
Gene sequence:
>699_bases ATGGGGCTAATCAGGAAGCACTTTGAGCACTGCTCTCATCAAGGTGCCGATCAACTTGATTGGTCCTTGCCCGCTCACCG TCGCGGGACCCTTGGCGGCATGGATGCCGCCACGGAGCTGACAAGGACGCACTTGCGGCGTGTCCTGCGATGGTGGGCGG GCAAGGGCCCTGCAGCAAGCGTGCAGCGGCGAGGACACCGCACCAGCAGGTTGCTCGGCTGTTTTATTGAACGCTATGCA CAACGATCAAGGCGACTGATCAAGCGCCCCAAGGCGCATCGAACAACCGATTGTTGCGGTGATCGCGATCCGGCACGGCA ATTCCCACGCGTGCAGCAGCACGCCGATAGTTGTCGAGCCGATGGATGTCGCGCAGCCGCGCGATGTCGTTGTCGTCGAT GTCATGCCAGCCCCACCGCTGGAACTGGCCCAGGAATCACTCGCCGTCCGAAAGCCACGGCATGTTCACCGTGCCGCCGC GATGGAACGCCAGCGCAGTCGCGTCGTCTGCAATGGCGTTGGCACCTGCATTCACCTCGATCTCAGCATCAACAGCAGCA TCCAGACATGCCGCCAGATGTCCAGCCGACACCCCGATATGCTGCGGCTCCACCAACCATTGCGCACATTACGCACGGTT ACCTGGGGAGGCATCCAGCCAACGGCAGGCCTCCAGCACGCAAACCGTCACCTGATTAG
Upstream 100 bases:
>100_bases CCTGAAACAGATGCTGCCGCGGCTGGCGACGGCACTGCTGCGCTGCACACCTTGCCCAGAGCGCGTTTTGCGTATGGCAA GCAACTTCCATGGCTGAGGG
Downstream 100 bases:
>100_bases CCCTGACCATCAGCTGGATTTTTGTTGCAGTCCTGCAAATAGCTTCGTTTTACCGATGTGTTCCATGATGTCTGATCTTG GCGCTGCTGATGCGAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MGLIRKHFEHCSHQGADQLDWSLPAHRRGTLGGMDAATELTRTHLRRVLRWWAGKGPAASVQRRGHRTSRLLGCFIERYA QRSRRLIKRPKAHRTTDCCGDRDPARQFPRVQQHADSCRADGCRAAARCRCRRCHASPTAGTGPGITRRPKATACSPCRR DGTPAQSRRLQWRWHLHSPRSQHQQQHPDMPPDVQPTPRYAAAPPTIAHITHGYLGRHPANGRPPARKPSPD
Sequences:
>Translated_232_residues MGLIRKHFEHCSHQGADQLDWSLPAHRRGTLGGMDAATELTRTHLRRVLRWWAGKGPAASVQRRGHRTSRLLGCFIERYA QRSRRLIKRPKAHRTTDCCGDRDPARQFPRVQQHADSCRADGCRAAARCRCRRCHASPTAGTGPGITRRPKATACSPCRR DGTPAQSRRLQWRWHLHSPRSQHQQQHPDMPPDVQPTPRYAAAPPTIAHITHGYLGRHPANGRPPARKPSPD >Mature_231_residues GLIRKHFEHCSHQGADQLDWSLPAHRRGTLGGMDAATELTRTHLRRVLRWWAGKGPAASVQRRGHRTSRLLGCFIERYAQ RSRRLIKRPKAHRTTDCCGDRDPARQFPRVQQHADSCRADGCRAAARCRCRRCHASPTAGTGPGITRRPKATACSPCRRD GTPAQSRRLQWRWHLHSPRSQHQQQHPDMPPDVQPTPRYAAAPPTIAHITHGYLGRHPANGRPPARKPSPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26200; Mature: 26069
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIRKHFEHCSHQGADQLDWSLPAHRRGTLGGMDAATELTRTHLRRVLRWWAGKGPAAS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH VQRRGHRTSRLLGCFIERYAQRSRRLIKRPKAHRTTDCCGDRDPARQFPRVQQHADSCRA HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH DGCRAAARCRCRRCHASPTAGTGPGITRRPKATACSPCRRDGTPAQSRRLQWRWHLHSPR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCEEEEEECCCCH SQHQQQHPDMPPDVQPTPRYAAAPPTIAHITHGYLGRHPANGRPPARKPSPD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLIRKHFEHCSHQGADQLDWSLPAHRRGTLGGMDAATELTRTHLRRVLRWWAGKGPAAS CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH VQRRGHRTSRLLGCFIERYAQRSRRLIKRPKAHRTTDCCGDRDPARQFPRVQQHADSCRA HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH DGCRAAARCRCRRCHASPTAGTGPGITRRPKATACSPCRRDGTPAQSRRLQWRWHLHSPR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCEEEEEECCCCH SQHQQQHPDMPPDVQPTPRYAAAPPTIAHITHGYLGRHPANGRPPARKPSPD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA