Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624599

Identifier: 84624599

GI number: 84624599

Start: 3327454

End: 3328416

Strand: Direct

Name: 84624599

Synonym: XOO_2942

Alternate gene names: NA

Gene position: 3327454-3328416 (Clockwise)

Preceding gene: 84624597

Following gene: 84624600

Centisome position: 67.35

GC content: 62.41

Gene sequence:

>963_bases
ATGGGCATCAATCTCGTGCAGTTTCAGCCAGGCTTGTCGCTGAGCGAGTTCATGGATCGCTACGGAACCGAAGCCAAGTG
TTACCGGGCGTTGTATCGGTGGCGCTGGCCGAAGGGATTTCGCTGCCCGCAGTGCGGCGGCCGCGCGCGCTCGCGCTTTC
GACGCGATGATCAGGTGTACTACCAGTGCCGGGCGTGCCGGCATCAAACCACCTTGCGTGCCGGCACGCTGTTGCAATCC
AGCAAGCTGTCTTTGCGCCTGTGGATGCAGGCGATGTACCTGTTGACCTCCAGCAAGACCAACCTGGCAGCACTGGAGTT
GAAGCGGCATCTTGGGGTGACCTACAAGGCGGCCTGGCGCATGAAGCACAAGATCATGCAGGCGATGACCGAGCGCGAAG
AACCGCGAAAACTCAAGGGATTCGTGCAGATCGATGACGCGTATCTGGGCGGTGAACGCAGCGGCGGCAAGCGCGGACGA
GGTTCGGAGAACAAACAGCCGTTCGTGATCGCGGTGCAAGTGGACCACAGCCACGAACACCCCGTCTTTGCGGTGATCGA
GCCGGTGAAGGCCTTTGACAACGCCTCGCTGGAGGACTGGATCGCGCGCCGTCTGGAGCCGGAGTGTGAGGTCTATAGCG
ACGGCCTGGCGTGCTTTCGCCGTCTGGAGGAGGCCGGGCATGCCCACACCACGCTCGATACCGGCGGCGGTCGTGCTGCA
ACCGACGTCCAGGGAGCACGTTGGTTGAATGTGGTGCTGGGCAATGTCAAACGCGCCATCAGCGGGACCTACCATGCGGT
GGGCCAGGCCAAGTATGCAAGGCGCTACCTGGCCGAGGCGGCCTATCGCTTCAACCGCCGATTCGACCTGAAACAGATGC
TGCCGCGGCTGGCGACGGCACTGCTGCGCTGCACACCTTGCCCAGAGCGCGTTTTGCGTATGGCAAGCAACTTCCATGGC
TGA

Upstream 100 bases:

>100_bases
GTCTCGCATTTGTGGTGCGTTGTTCAGAGGTTCCCTAGTTGCAGGATCTGCGACGCTGCGGTTGGACAATGCCCCCAGCT
CAAGGCAACGGAGGTGGGAG

Downstream 100 bases:

>100_bases
GGGATGGGGCTAATCAGGAAGCACTTTGAGCACTGCTCTCATCAAGGTGCCGATCAACTTGATTGGTCCTTGCCCGCTCA
CCGTCGCGGGACCCTTGGCG

Product: ISXo2 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGINLVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCGGRARSRFRRDDQVYYQCRACRHQTTLRAGTLLQS
SKLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWRMKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGR
GSENKQPFVIAVQVDHSHEHPVFAVIEPVKAFDNASLEDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAA
TDVQGARWLNVVLGNVKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATALLRCTPCPERVLRMASNFHG

Sequences:

>Translated_320_residues
MGINLVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCGGRARSRFRRDDQVYYQCRACRHQTTLRAGTLLQS
SKLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWRMKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGR
GSENKQPFVIAVQVDHSHEHPVFAVIEPVKAFDNASLEDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAA
TDVQGARWLNVVLGNVKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATALLRCTPCPERVLRMASNFHG
>Mature_319_residues
GINLVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCGGRARSRFRRDDQVYYQCRACRHQTTLRAGTLLQSS
KLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWRMKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGRG
SENKQPFVIAVQVDHSHEHPVFAVIEPVKAFDNASLEDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAAT
DVQGARWLNVVLGNVKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATALLRCTPCPERVLRMASNFHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003220 [H]

Pfam domain/function: PF03811 Ins_element1 [H]

EC number: NA

Molecular weight: Translated: 36635; Mature: 36503

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGINLVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCGGRARSRFRRDDQVY
CCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHH
YQCRACRHQTTLRAGTLLQSSKLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
MKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGRGSENKQPFVIAVQVDHSHEH
HHHHHHHHHHHCCCCHHHHCEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PVFAVIEPVKAFDNASLEDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAA
CEEEEEHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
TDVQGARWLNVVLGNVKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLRCTPCPERVLRMASNFHG
HHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
GINLVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCGGRARSRFRRDDQVY
CCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHH
YQCRACRHQTTLRAGTLLQSSKLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
MKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGRGSENKQPFVIAVQVDHSHEH
HHHHHHHHHHHCCCCHHHHCEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
PVFAVIEPVKAFDNASLEDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAA
CEEEEEHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
TDVQGARWLNVVLGNVKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLRCTPCPERVLRMASNFHG
HHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6306577; 9847077; 11016950 [H]