| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624510
Identifier: 84624510
GI number: 84624510
Start: 3204652
End: 3205644
Strand: Direct
Name: 84624510
Synonym: XOO_2853
Alternate gene names: NA
Gene position: 3204652-3205644 (Clockwise)
Preceding gene: 84624509
Following gene: 84624511
Centisome position: 64.87
GC content: 67.17
Gene sequence:
>993_bases ATGTGCGTTGCCGGACGTTGTGCCTTCGCGTATACGCACGGAATCGCCGCAGCCGTGGCGGTCTCGCCCACCGTCATAGG TCACCATCGCGCCCCCCGTTTCACGCCCAGTTCGCACGCCCTTGCAGACCGTTCCAGCTTCCAAGCCGCTCCCCCTGCAA CCGCGACGCCATTGCGCCCGTGGGTGTTTCCCGTGGGCGCACTAATGGGTATTGACGTACGGCACGAACATTCCGAGATA CCGCCAGTCGCGTCCGCTCAGCGGCACGAGCGCCTGCATCCGCGACGCAGGCACCCCCGGCTGCTTGGATGGCTGCTCCT CACGCTGGCATCTGGCTCCTGCGGCAGCACCCTGGCCAATGACTTCGGCGGTGCGGTGGCGGTGACCTCCAGCCTGATCG ACCGCGGCATCTCCATCGCACCCAACAAGGTCACCGTACAGGCGGCCGGTTACTGGCTGCCCTCCCCTGGCTGGTCGGCC TCTACCTCGGTCGCGCTGCAGTCGACCGACTGGAGCGACCCGGTGGCAGTCACCGCCCAGGTCGGGCGCGCCTGGATGCT GGGCGACCGCTGGCAGATGCAGGCGAGCCTGCTCTACTACGGCTACCCGACCGACCGCTCCACCCGCACCTTCAACCGTC AGGAAGGCAGCCTGGCCTGGTCTTACCGCGACGTCGTGACGTTTGCGATATCCACCTTCAACTTCCCGCGCGCCGACCAG TCGCCGTGGAATGTCGCCTTCGACATCACCGGCAACGTCCCGCTGAGCGACGATGTCAGCCTGTCGCTCGGTGCCGGCTC GTCGCGCTTTCCGGCGATGGCCTACGGTGCGCCTCACTCCGGCCGCTATCAGTACGGTCAGCTGGGCCTGAAGTGGAGCC GCCTCGGATGGACGCTGAAAGCCGAGCGCATCCTGACCAGCGGCAATACCCCGCGCATGCAGGGCGGCCCCGGCGAAACA CCGTGGCTGGGCACGGTCTCCAGAACCTTCTGA
Upstream 100 bases:
>100_bases GTGGCTGTGGCGGGTGCGCTTTTCCAGCTGCGGTGGCCTGTCCGTTGGCCGCCTGTCCGGTCCGGACCTGGGGACATCCT GCACAGGCCGGACAGGGTGG
Downstream 100 bases:
>100_bases TCCATACGCAACCTTTTGCCTACCGACGCGCACTGACGTGCGTTACCTGCCATGCCTGCCTTGATGAATGACACCGACAC CCTGGGCGATGCCACCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MCVAGRCAFAYTHGIAAAVAVSPTVIGHHRAPRFTPSSHALADRSSFQAAPPATATPLRPWVFPVGALMGIDVRHEHSEI PPVASAQRHERLHPRRRHPRLLGWLLLTLASGSCGSTLANDFGGAVAVTSSLIDRGISIAPNKVTVQAAGYWLPSPGWSA STSVALQSTDWSDPVAVTAQVGRAWMLGDRWQMQASLLYYGYPTDRSTRTFNRQEGSLAWSYRDVVTFAISTFNFPRADQ SPWNVAFDITGNVPLSDDVSLSLGAGSSRFPAMAYGAPHSGRYQYGQLGLKWSRLGWTLKAERILTSGNTPRMQGGPGET PWLGTVSRTF
Sequences:
>Translated_330_residues MCVAGRCAFAYTHGIAAAVAVSPTVIGHHRAPRFTPSSHALADRSSFQAAPPATATPLRPWVFPVGALMGIDVRHEHSEI PPVASAQRHERLHPRRRHPRLLGWLLLTLASGSCGSTLANDFGGAVAVTSSLIDRGISIAPNKVTVQAAGYWLPSPGWSA STSVALQSTDWSDPVAVTAQVGRAWMLGDRWQMQASLLYYGYPTDRSTRTFNRQEGSLAWSYRDVVTFAISTFNFPRADQ SPWNVAFDITGNVPLSDDVSLSLGAGSSRFPAMAYGAPHSGRYQYGQLGLKWSRLGWTLKAERILTSGNTPRMQGGPGET PWLGTVSRTF >Mature_330_residues MCVAGRCAFAYTHGIAAAVAVSPTVIGHHRAPRFTPSSHALADRSSFQAAPPATATPLRPWVFPVGALMGIDVRHEHSEI PPVASAQRHERLHPRRRHPRLLGWLLLTLASGSCGSTLANDFGGAVAVTSSLIDRGISIAPNKVTVQAAGYWLPSPGWSA STSVALQSTDWSDPVAVTAQVGRAWMLGDRWQMQASLLYYGYPTDRSTRTFNRQEGSLAWSYRDVVTFAISTFNFPRADQ SPWNVAFDITGNVPLSDDVSLSLGAGSSRFPAMAYGAPHSGRYQYGQLGLKWSRLGWTLKAERILTSGNTPRMQGGPGET PWLGTVSRTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35675; Mature: 35675
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVAGRCAFAYTHGIAAAVAVSPTVIGHHRAPRFTPSSHALADRSSFQAAPPATATPLRP CCCCCCCHHHHHHHHHEEEEECCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC WVFPVGALMGIDVRHEHSEIPPVASAQRHERLHPRRRHPRLLGWLLLTLASGSCGSTLAN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCHHHH DFGGAVAVTSSLIDRGISIAPNKVTVQAAGYWLPSPGWSASTSVALQSTDWSDPVAVTAQ HHCCHHHHHHHHHHCCCEECCCEEEEEECCEECCCCCCCCCCEEEEECCCCCCCEEEEEE VGRAWMLGDRWQMQASLLYYGYPTDRSTRTFNRQEGSLAWSYRDVVTFAISTFNFPRADQ CCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHEEEEHHHHCCCCCCCC SPWNVAFDITGNVPLSDDVSLSLGAGSSRFPAMAYGAPHSGRYQYGQLGLKWSRLGWTLK CCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCEEEHHCCEEEE AERILTSGNTPRMQGGPGETPWLGTVSRTF EEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCVAGRCAFAYTHGIAAAVAVSPTVIGHHRAPRFTPSSHALADRSSFQAAPPATATPLRP CCCCCCCHHHHHHHHHEEEEECCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC WVFPVGALMGIDVRHEHSEIPPVASAQRHERLHPRRRHPRLLGWLLLTLASGSCGSTLAN HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCHHHH DFGGAVAVTSSLIDRGISIAPNKVTVQAAGYWLPSPGWSASTSVALQSTDWSDPVAVTAQ HHCCHHHHHHHHHHCCCEECCCEEEEEECCEECCCCCCCCCCEEEEECCCCCCCEEEEEE VGRAWMLGDRWQMQASLLYYGYPTDRSTRTFNRQEGSLAWSYRDVVTFAISTFNFPRADQ CCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHEEEEHHHHCCCCCCCC SPWNVAFDITGNVPLSDDVSLSLGAGSSRFPAMAYGAPHSGRYQYGQLGLKWSRLGWTLK CCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCEEEHHCCEEEE AERILTSGNTPRMQGGPGETPWLGTVSRTF EEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA