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The map label for this gene is yfcN [C]

Identifier: 84624466

GI number: 84624466

Start: 3158190

End: 3158729

Strand: Direct

Name: yfcN [C]

Synonym: XOO_2809

Alternate gene names: 84624466

Gene position: 3158190-3158729 (Clockwise)

Preceding gene: 84624461

Following gene: 84624476

Centisome position: 63.93

GC content: 66.67

Gene sequence:

>540_bases
ATGTCGCATCCTGAAGACGAAGACGACGGCGCGTTGTTCCGCGCAGCGATCGGCGCGGTCAAGCCGATTCGTGAAGTCGC
CCCACCGGCCAACGCCAAGCCGCGCCCCAAGCCGCGTGCGCGCATGGCCGAGCGCGATGACGCCGAAGCGCTCGGCGAAT
TTGCGCGCCTGTTACGCGACAGCGCGCCGCTGGAAGCGGGCGATACCGCCAGCTATCGGCGCGAGAATCTTCCCAGCCGA
TTGTTTCAGCGACTCAAGCGCGGGCAATTTTCGGTGCAGGACGAACTGGATCTGCACGGCGCCACCGCCGCTCAGGCCGA
ATCGCTGTTGCGCCAGTTTCTGCTGGAGGCGCATGCGCACGAGCATGGGTGCGTGCGCATCATCCACGGCAAGGGCCTGC
AGTCCGACAACGGTGCGCCCGTGCTGAAAAACCTGATGGACCGGCTGCTGCGTCAACGCAACGATGTGCTGGCGTTTCAT
TCGGCGCCGCCCACGCAGGGCGGCACCGGGGCGCTGCTGGTGTTGCTGGCACGGCGGTAG

Upstream 100 bases:

>100_bases
TGAGACTCCTCGGAAAACCGGACAATGATACCGGATGCGTCCCGCGCCTTCGCGCTTGATCTTCGCGTGCGTCTGCGCTT
GGACCGGGTACGCTGTGCGG

Downstream 100 bases:

>100_bases
GCGGTAGGCGGTAGGCGGTAGGCGGTAGGCGGATGGCGGTAGGCGGATGGCGGATGGCGGATGGCGGATGGCGGATGGCG
GTAGGCGGTAGGCGGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEALGEFARLLRDSAPLEAGDTASYRRENLPSR
LFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARR

Sequences:

>Translated_179_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEALGEFARLLRDSAPLEAGDTASYRRENLPSR
LFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARR
>Mature_178_residues
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEALGEFARLLRDSAPLEAGDTASYRRENLPSRL
FQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHS
APPTQGGTGALLVLLARR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=31.8181818181818, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787602, Length=174, Percent_Identity=28.735632183908, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 19659; Mature: 19527

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEALGEFARLLRD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPSRLFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAH
CCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHEEECC
>Mature Secondary Structure 
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEALGEFARLLRD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPSRLFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAH
CCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA