Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624327

Identifier: 84624327

GI number: 84624327

Start: 3003668

End: 3004627

Strand: Direct

Name: 84624327

Synonym: XOO_2670

Alternate gene names: NA

Gene position: 3003668-3004627 (Clockwise)

Preceding gene: 84624323

Following gene: 84624328

Centisome position: 60.8

GC content: 62.92

Gene sequence:

>960_bases
ATGAACATGGCCGCAGTCAGTCACGAAGCGCGTTTTTCCGCCTATCTGGATGAGCTATCCGCTGGGCTTGGTTATGCCGA
TCGGGCGGCGGGCTTACACGGTTATTGCCGTGGATTGATGCTGCCGTTGGAGCGCAAAAGCGTGGAGCCGCTGGCGGCGC
ATCTGGATCCGCTGCGGACACGGGCTCAGCATCAAGCGTTGCACCATTTCGTGGCCAAGTCGGATTGGTCTGATGCGGCG
GTGCTGGAGCGCGTCCGTCAGTACGTCTCATCACGAATGGAGTTGAAGGGCGAGGTGTACTGGATCGTGGACCACACGGG
TTTTCGCAAGAAGGGCAAGCATTCGGTCGGCGTGGCCCGACAATACTGCGGGGAGATCGGCAAGCAGGACAACTGCCAGG
TGGCAGTGAGCGTATCGCTGGCGACGCCGGCGGCGAGCGTGCCGATGGCCTTTGGGCTGTATCTTCCTGAGGCTTGGGCG
GCCGATGCGGCGCAGCGGGAGAAGGCCGGTGTTCCGAAGGAGATCACGTTCGCCACCAAGCCGGAAATAGCGCTGGCGCA
GATACATGCTGCGCATGCCGCAGGTGTTGTGCGCGGCACGGTGTTGGCCGATGCGGCCTATGGCAGCAATACGGCCTGGC
GTGATGCGCTGGCGGCCTTGGAACTGACCTATGCGGTGGGGATTGTGTCCAGCGTCAAGGTCTGGCCGCCTGGGCAAACG
CCCGAGGCGCCCGCGCCGTGGAAGGGTCAGGGCCGTCCTGCGATCCGCCATCGCCGCACGGCTGATCGTCAACCACAGTC
GGTGGAGGCCCTGGCGCGATCCTTGCCTCGGCGCGCCTGTAATGACCCACTGATTTTCTGCTCAAGTGCTACTTTCCCCG
AAGGAGACACCGATGAGCGAAATGATGGAAGAAGAGATCAAGCGCTGGACCGCCCGTCGCAAGTCGGCGCTGGTCCTTGA

Upstream 100 bases:

>100_bases
TCAGCATTATACGGGCTGCGCGCATAAAATTTTTGCGTAATTGCTTAGTACTACTATGTCATAAAAAGGTTATTCTGCAG
TCAGTCCACAACGCACTGAG

Downstream 100 bases:

>100_bases
GATCATCCAGGGCAAGACGACGGTGGCAGCGGCCAGCCGCCAGTTCGACCTGACACCGGCTGAGATCGAAAGCTGGGTTG
AGGATGGCAAGCGCGGTATG

Product: ISXo8 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNMAAVSHEARFSAYLDELSAGLGYADRAAGLHGYCRGLMLPLERKSVEPLAAHLDPLRTRAQHQALHHFVAKSDWSDAA
VLERVRQYVSSRMELKGEVYWIVDHTGFRKKGKHSVGVARQYCGEIGKQDNCQVAVSVSLATPAASVPMAFGLYLPEAWA
ADAAQREKAGVPKEITFATKPEIALAQIHAAHAAGVVRGTVLADAAYGSNTAWRDALAALELTYAVGIVSSVKVWPPGQT
PEAPAPWKGQGRPAIRHRRTADRQPQSVEALARSLPRRACNDPLIFCSSATFPEGDTDERNDGRRDQALDRPSQVGAGP

Sequences:

>Translated_319_residues
MNMAAVSHEARFSAYLDELSAGLGYADRAAGLHGYCRGLMLPLERKSVEPLAAHLDPLRTRAQHQALHHFVAKSDWSDAA
VLERVRQYVSSRMELKGEVYWIVDHTGFRKKGKHSVGVARQYCGEIGKQDNCQVAVSVSLATPAASVPMAFGLYLPEAWA
ADAAQREKAGVPKEITFATKPEIALAQIHAAHAAGVVRGTVLADAAYGSNTAWRDALAALELTYAVGIVSSVKVWPPGQT
PEAPAPWKGQGRPAIRHRRTADRQPQSVEALARSLPRRACNDPLIFCSSATFPEGDTDERNDGRRDQALDRPSQVGAGP
>Mature_319_residues
MNMAAVSHEARFSAYLDELSAGLGYADRAAGLHGYCRGLMLPLERKSVEPLAAHLDPLRTRAQHQALHHFVAKSDWSDAA
VLERVRQYVSSRMELKGEVYWIVDHTGFRKKGKHSVGVARQYCGEIGKQDNCQVAVSVSLATPAASVPMAFGLYLPEAWA
ADAAQREKAGVPKEITFATKPEIALAQIHAAHAAGVVRGTVLADAAYGSNTAWRDALAALELTYAVGIVSSVKVWPPGQT
PEAPAPWKGQGRPAIRHRRTADRQPQSVEALARSLPRRACNDPLIFCSSATFPEGDTDERNDGRRDQALDRPSQVGAGP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34505; Mature: 34505

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMAAVSHEARFSAYLDELSAGLGYADRAAGLHGYCRGLMLPLERKSVEPLAAHLDPLRT
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHH
RAQHQALHHFVAKSDWSDAAVLERVRQYVSSRMELKGEVYWIVDHTGFRKKGKHSVGVAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHH
QYCGEIGKQDNCQVAVSVSLATPAASVPMAFGLYLPEAWAADAAQREKAGVPKEITFATK
HHHHHHCCCCCCEEEEEEEECCCCHHCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCC
PEIALAQIHAAHAAGVVRGTVLADAAYGSNTAWRDALAALELTYAVGIVSSVKVWPPGQT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCC
PEAPAPWKGQGRPAIRHRRTADRQPQSVEALARSLPRRACNDPLIFCSSATFPEGDTDER
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
NDGRRDQALDRPSQVGAGP
CCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNMAAVSHEARFSAYLDELSAGLGYADRAAGLHGYCRGLMLPLERKSVEPLAAHLDPLRT
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHH
RAQHQALHHFVAKSDWSDAAVLERVRQYVSSRMELKGEVYWIVDHTGFRKKGKHSVGVAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHH
QYCGEIGKQDNCQVAVSVSLATPAASVPMAFGLYLPEAWAADAAQREKAGVPKEITFATK
HHHHHHCCCCCCEEEEEEEECCCCHHCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCC
PEIALAQIHAAHAAGVVRGTVLADAAYGSNTAWRDALAALELTYAVGIVSSVKVWPPGQT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCC
PEAPAPWKGQGRPAIRHRRTADRQPQSVEALARSLPRRACNDPLIFCSSATFPEGDTDER
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
NDGRRDQALDRPSQVGAGP
CCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]