| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624265
Identifier: 84624265
GI number: 84624265
Start: 2909563
End: 2910363
Strand: Direct
Name: 84624265
Synonym: XOO_2608
Alternate gene names: NA
Gene position: 2909563-2910363 (Clockwise)
Preceding gene: 84624264
Following gene: 84624266
Centisome position: 58.9
GC content: 62.42
Gene sequence:
>801_bases ATGACCCCCCGGCATCCTCGCGCGCTTACATCGAGACCGGTTACCTGGCTGCACCGAGGAACGTTGGTCCGTTTACGCTC GCCCGCAGCTCCTACAACCCGGCAGCCAAGGTCTCGGTGGGCTGGATTCCATTACGCGATGACGGAGCATCCGAAATTGA ATATCGATGTGTTCGTTTATCCAGCCGGGCAACGCGCGCAAGCCGAGGCTATCGAACACGGCATGAGCGCCTTTCGCAAG GACCTCGCCGCGGCGCGCACACAAGGCACCTGTTCGCGGCTGGACGAGCTGGACCAGAGCAGGTTCGTGTTGACCAGCGA CGATGCCCCGAAAAACATCCCGGCCAATACGGTGGATGCCAAGGTGATCGCGGCCATCGCGGACGCCGAACCCTTCGTTG GGGAAACGTTGCAGCTCAGCGTGGACCTGGCGTCGTCCGGCATGCCGCGACTGTCCAACGGCTACCTGGTCTACACGCAG CTGCACTACATCAAGGTGCGGGTATCGGCAGCGCAGCAAGCAATCGCGCAGACCAGGTTCGACGCACTGGCCGACCAGGC TGCGCGCGCGCTCGTACCGGCCATCCAAGTCAGCAATGTTGGCGGGTGCGCGGACCTGAGCGTCCACCTCGATGCCAAGG CCACGCCCGATCAAGGCGCCGTTGAGATGGCGCGCCAAATCAAGACTCATCTTGGCTTCAATTGCCACGGCTCGACCAGG CAGGCCGGCATCGAAGAGCTGGTCAAGACAGCCGAGGTAATCGAAATCGCCTACGATCCCAGCGAGTGGAAGTCGCAGTG A
Upstream 100 bases:
>100_bases CGGCATCGTTCTGCACAGGAGGTGCACATGGTCGGTTGTCGCGTGGTGTTCTTCGCCTACACGCTGGGTGTGGCCCCAGT TGCGTTATCGGCCACGCCGG
Downstream 100 bases:
>100_bases GGCAACACACGCGCGATACTGTGGCTCCTGTCTGAGCTCAATGCTGGTATCGCCATGACCAAAGGTCCGATCCGCCTCGA CGTCGCCGTCAGTTATGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTPRHPRALTSRPVTWLHRGTLVRLRSPAAPTTRQPRSRWAGFHYAMTEHPKLNIDVFVYPAGQRAQAEAIEHGMSAFRK DLAAARTQGTCSRLDELDQSRFVLTSDDAPKNIPANTVDAKVIAAIADAEPFVGETLQLSVDLASSGMPRLSNGYLVYTQ LHYIKVRVSAAQQAIAQTRFDALADQAARALVPAIQVSNVGGCADLSVHLDAKATPDQGAVEMARQIKTHLGFNCHGSTR QAGIEELVKTAEVIEIAYDPSEWKSQ
Sequences:
>Translated_266_residues MTPRHPRALTSRPVTWLHRGTLVRLRSPAAPTTRQPRSRWAGFHYAMTEHPKLNIDVFVYPAGQRAQAEAIEHGMSAFRK DLAAARTQGTCSRLDELDQSRFVLTSDDAPKNIPANTVDAKVIAAIADAEPFVGETLQLSVDLASSGMPRLSNGYLVYTQ LHYIKVRVSAAQQAIAQTRFDALADQAARALVPAIQVSNVGGCADLSVHLDAKATPDQGAVEMARQIKTHLGFNCHGSTR QAGIEELVKTAEVIEIAYDPSEWKSQ >Mature_265_residues TPRHPRALTSRPVTWLHRGTLVRLRSPAAPTTRQPRSRWAGFHYAMTEHPKLNIDVFVYPAGQRAQAEAIEHGMSAFRKD LAAARTQGTCSRLDELDQSRFVLTSDDAPKNIPANTVDAKVIAAIADAEPFVGETLQLSVDLASSGMPRLSNGYLVYTQL HYIKVRVSAAQQAIAQTRFDALADQAARALVPAIQVSNVGGCADLSVHLDAKATPDQGAVEMARQIKTHLGFNCHGSTRQ AGIEELVKTAEVIEIAYDPSEWKSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29019; Mature: 28888
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRHPRALTSRPVTWLHRGTLVRLRSPAAPTTRQPRSRWAGFHYAMTEHPKLNIDVFVY CCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCHHHHCCEEEEECCCCCCEEEEEEE PAGQRAQAEAIEHGMSAFRKDLAAARTQGTCSRLDELDQSRFVLTSDDAPKNIPANTVDA ECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCH KVIAAIADAEPFVGETLQLSVDLASSGMPRLSNGYLVYTQLHYIKVRVSAAQQAIAQTRF HHHEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHH DALADQAARALVPAIQVSNVGGCADLSVHLDAKATPDQGAVEMARQIKTHLGFNCHGSTR HHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHH QAGIEELVKTAEVIEIAYDPSEWKSQ HHHHHHHHHHHHHEEEEECCHHHCCC >Mature Secondary Structure TPRHPRALTSRPVTWLHRGTLVRLRSPAAPTTRQPRSRWAGFHYAMTEHPKLNIDVFVY CCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCHHHHCCEEEEECCCCCCEEEEEEE PAGQRAQAEAIEHGMSAFRKDLAAARTQGTCSRLDELDQSRFVLTSDDAPKNIPANTVDA ECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCH KVIAAIADAEPFVGETLQLSVDLASSGMPRLSNGYLVYTQLHYIKVRVSAAQQAIAQTRF HHHEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHH DALADQAARALVPAIQVSNVGGCADLSVHLDAKATPDQGAVEMARQIKTHLGFNCHGSTR HHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHH QAGIEELVKTAEVIEIAYDPSEWKSQ HHHHHHHHHHHHHEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA