Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is ybeZ [H]

Identifier: 84624264

GI number: 84624264

Start: 2908303

End: 2909289

Strand: Direct

Name: ybeZ [H]

Synonym: XOO_2607

Alternate gene names: 84624264

Gene position: 2908303-2909289 (Clockwise)

Preceding gene: 84624263

Following gene: 84624265

Centisome position: 58.87

GC content: 62.51

Gene sequence:

>987_bases
ATGAACGCATCAGCACATCGCGACTTCACCCTGGAACCCGAGGACACCGAGCGCCTCGCCAATCTCGCCGGCCCGTTCGA
TGCGCATCTGCGCCAGATCGAACTCAAGCTTGGCGTCGAAATCGGCAACCGCGGCAATATCTTCCGGGTGACCGGACCGG
AGCCGGCCATCGTCGCCACGCAGTCGCTGTTGACCGCGTTGTACGAAGAGGCCGCTGGCACCACCTTCGACGCCCATGCG
ATCCATCTGCGCCTCAACGATGCCAATCTCGAACACGTGGCCGAGCGCGCCTACCAGGCCCAGGATGTCGCCATCAAGGT
CAAACGTGGGACCGTGCGTGGGCGTGGCGCCAACCAGACCAAATACCTGCATGCGATCGTCACGCACGACATCAATTTCG
GCATCGGCCCGGCAGGTACCGGCAAGACCTTCCTGGCCGTGGCGTGTGCGGTAGAAGCGCTCAACGAATCGCGTGTGCAG
CGCCTGATCCTGGTGCGCCCAGCAGTGGAAGCCGGCGAGAAGCTGGGCTTTTTGCCAGGCGATCTCAGCCAGAAGGTCGA
CCCGTACCTGCGTCCGCTCTACGACGCGCTATACGAAATGCTGGGCGTGGAAAAAGTGGTCAAGCTGCTGGAGCGCAACG
TCATCGAGATCGCGCCGCTGGCGTACATGCGCGGCCGCACGCTCAACGATGCGTACGTGATCCTGGATGAGGCGCAGAAC
ACCACCATCGAGCAGATGAAGATGTTCCTGACCCGTCTGGGCTTCGGCTCCACGGCGGTGGTGACGGGCGACCTCACCCA
GATCGATCTGCCCAAACATGTCAAATCCGGCCTGCGCGATGCGATCGAAGTGCTGCGCGATGTGGAAGGCGCCAGCTTCA
CGTTCTTCGAAGCGCGCGACGTGGTACGCCATCCGTTGGTGCAACGCATCGTCACTGCTTACGAGAAGCGCGATCTGGCC
GAAAAGCCTGCCGCACCTGCGGCATGA

Upstream 100 bases:

>100_bases
GTGCCGCGCCGTTCGGTGTGTTGGTGGGATTACATGCCGCGCGCTACCCTTTCGACCCCGCCCTACCGACGCGCGCCTGC
GTGCGCTGTCCGATCCGATC

Downstream 100 bases:

>100_bases
AGCAGGCTGGCGGGAGGTGACCGCGGATGCCCTGCTCGGCACGACTCGGTGCAACGCGGGGCAAGCCGGAAAACCGCCAA
GTAGCGCGGTCGTCGCACAG

Product: ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNASAHRDFTLEPEDTERLANLAGPFDAHLRQIELKLGVEIGNRGNIFRVTGPEPAIVATQSLLTALYEEAAGTTFDAHA
IHLRLNDANLEHVAERAYQAQDVAIKVKRGTVRGRGANQTKYLHAIVTHDINFGIGPAGTGKTFLAVACAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGASFTFFEARDVVRHPLVQRIVTAYEKRDLA
EKPAAPAA

Sequences:

>Translated_328_residues
MNASAHRDFTLEPEDTERLANLAGPFDAHLRQIELKLGVEIGNRGNIFRVTGPEPAIVATQSLLTALYEEAAGTTFDAHA
IHLRLNDANLEHVAERAYQAQDVAIKVKRGTVRGRGANQTKYLHAIVTHDINFGIGPAGTGKTFLAVACAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGASFTFFEARDVVRHPLVQRIVTAYEKRDLA
EKPAAPAA
>Mature_328_residues
MNASAHRDFTLEPEDTERLANLAGPFDAHLRQIELKLGVEIGNRGNIFRVTGPEPAIVATQSLLTALYEEAAGTTFDAHA
IHLRLNDANLEHVAERAYQAQDVAIKVKRGTVRGRGANQTKYLHAIVTHDINFGIGPAGTGKTFLAVACAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGASFTFFEARDVVRHPLVQRIVTAYEKRDLA
EKPAAPAA

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=323, Percent_Identity=60.6811145510836, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1787257, Length=202, Percent_Identity=49.5049504950495, Blast_Score=191, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 36073; Mature: 36073

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASAHRDFTLEPEDTERLANLAGPFDAHLRQIELKLGVEIGNRGNIFRVTGPEPAIVAT
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHEEEEEEEEECCCCCEEEECCCCCHHHHH
QSLLTALYEEAAGTTFDAHAIHLRLNDANLEHVAERAYQAQDVAIKVKRGTVRGRGANQT
HHHHHHHHHHHCCCEEECEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCH
KYLHAIVTHDINFGIGPAGTGKTFLAVACAVEALNESRVQRLILVRPAVEAGEKLGFLPG
HHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCC
DLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN
CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGASFTFFEARD
CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
VVRHPLVQRIVTAYEKRDLAEKPAAPAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNASAHRDFTLEPEDTERLANLAGPFDAHLRQIELKLGVEIGNRGNIFRVTGPEPAIVAT
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHEEEEEEEEECCCCCEEEECCCCCHHHHH
QSLLTALYEEAAGTTFDAHAIHLRLNDANLEHVAERAYQAQDVAIKVKRGTVRGRGANQT
HHHHHHHHHHHCCCEEECEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCH
KYLHAIVTHDINFGIGPAGTGKTFLAVACAVEALNESRVQRLILVRPAVEAGEKLGFLPG
HHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCC
DLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN
CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGASFTFFEARD
CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
VVRHPLVQRIVTAYEKRDLAEKPAAPAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]