| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is gno [H]
Identifier: 84624108
GI number: 84624108
Start: 2723408
End: 2724181
Strand: Direct
Name: gno [H]
Synonym: XOO_2451
Alternate gene names: 84624108
Gene position: 2723408-2724181 (Clockwise)
Preceding gene: 84624107
Following gene: 84624109
Centisome position: 55.13
GC content: 61.5
Gene sequence:
>774_bases GTGAATATCGCCCTCGATCAGAACGACCCGTTTTCGTTGCAGGGCAAACGTATTCTGGTCACCGGTGCATCGTCAGGCAT CGGACGGCAGATCGCACTGAGCTGCGCGCAGATCGGTGCACAACTGGTCATCACAGGCCGCAACGAAGGGCGCTTGGCCG AGACCTTCGCCTTACTTGAAGGCACAGGGCATGCGCAGGTGATCGCCAACCTGGACAAGCAGGAAGACATCGACCATCTC GTGACTTCGGTCGGCGTCCTGGATGGCGTCGCACACGCAGCCGGCATCGCCCGACTGGCACCATTCCGGATGATCAACCG CGCGCATCTGGACGAAACGTTCGCCAGTAATGTCTATGCACCGCTGCTACTGACGCGCGGCCTGCTGGCGAAAAAGCGCA TCAACGCCAACGGCTCCATCCTGTTGATATCGGCGGTGGGCTCGCACATCGGTCCTGTCGCCACTGCCGCCTACTCTGCC AGCAAGGCTGCGCTGCTCGGCGCAATGCGCACTCTGGCACTGGAAGTGGCCAAGCACGGTATCCGCGCCAACTGTATCGT GCCCGGCTATGTGCGCACGCCAATGCTCGAGGGCCTCAAACAGAGCGGCGGCAGCATCGACGAGCACGCCAAACTGACCC CCTTGGGACTTGGCGAACCGGAAGACGTGGCTTACGCGGCGGTGTTTTATCTATCCGACGCCAGTCGCTGGGTCACCCGC AACTACTTCCTCGTAGATGGTGGCCTGACCGTGCCGATGGACGTCTACGCATGA
Upstream 100 bases:
>100_bases CACCCAAGCGCGTATTGCTATGCGGCTTTGGCATTGGCTTGTCGTGGGGCACGTGCCTGGTGGATATCGACGGTGCGGTG TTTCCGGACTTGATCGAGTC
Downstream 100 bases:
>100_bases GCAATGCGACTCGTAAAGCCTTTTTCCTAGAGGGCAAGACCATCCTGGTCACCGGCGCATCGTCCGGCCTTGGCCAGGAA ATCGCACTGACCTGCGCACG
Product: 3-oxoacyl-[ACP] reductase
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNIALDQNDPFSLQGKRILVTGASSGIGRQIALSCAQIGAQLVITGRNEGRLAETFALLEGTGHAQVIANLDKQEDIDHL VTSVGVLDGVAHAAGIARLAPFRMINRAHLDETFASNVYAPLLLTRGLLAKKRINANGSILLISAVGSHIGPVATAAYSA SKAALLGAMRTLALEVAKHGIRANCIVPGYVRTPMLEGLKQSGGSIDEHAKLTPLGLGEPEDVAYAAVFYLSDASRWVTR NYFLVDGGLTVPMDVYA
Sequences:
>Translated_257_residues MNIALDQNDPFSLQGKRILVTGASSGIGRQIALSCAQIGAQLVITGRNEGRLAETFALLEGTGHAQVIANLDKQEDIDHL VTSVGVLDGVAHAAGIARLAPFRMINRAHLDETFASNVYAPLLLTRGLLAKKRINANGSILLISAVGSHIGPVATAAYSA SKAALLGAMRTLALEVAKHGIRANCIVPGYVRTPMLEGLKQSGGSIDEHAKLTPLGLGEPEDVAYAAVFYLSDASRWVTR NYFLVDGGLTVPMDVYA >Mature_257_residues MNIALDQNDPFSLQGKRILVTGASSGIGRQIALSCAQIGAQLVITGRNEGRLAETFALLEGTGHAQVIANLDKQEDIDHL VTSVGVLDGVAHAAGIARLAPFRMINRAHLDETFASNVYAPLLLTRGLLAKKRINANGSILLISAVGSHIGPVATAAYSA SKAALLGAMRTLALEVAKHGIRANCIVPGYVRTPMLEGLKQSGGSIDEHAKLTPLGLGEPEDVAYAAVFYLSDASRWVTR NYFLVDGGLTVPMDVYA
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=31.8897637795276, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI5031737, Length=239, Percent_Identity=33.4728033472803, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=32.1285140562249, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=31.4285714285714, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI33667109, Length=182, Percent_Identity=36.2637362637363, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=32.6359832635983, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=30.5785123966942, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=28.4046692607004, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI19923817, Length=261, Percent_Identity=28.3524904214559, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=30.6878306878307, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI142976729, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503817, Length=196, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI59889578, Length=223, Percent_Identity=30.4932735426009, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4504505, Length=191, Percent_Identity=30.3664921465969, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI210032110, Length=191, Percent_Identity=28.7958115183246, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI32455239, Length=254, Percent_Identity=27.5590551181102, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI5031765, Length=254, Percent_Identity=27.5590551181102, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI40807363, Length=194, Percent_Identity=27.8350515463918, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI7657478, Length=229, Percent_Identity=27.0742358078603, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=31.8725099601594, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=31.9230769230769, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=29.1497975708502, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787526, Length=234, Percent_Identity=32.9059829059829, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=29.3650793650794, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=31.0483870967742, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=28.8, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=30.4, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787545, Length=257, Percent_Identity=27.6264591439689, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=32.8063241106719, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=29.5081967213115, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=27.6422764227642, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=30.6273062730627, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=32.1033210332103, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=28.6852589641434, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=31.5589353612167, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17560150, Length=275, Percent_Identity=30.5454545454545, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17562990, Length=274, Percent_Identity=30.6569343065693, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=32.1138211382114, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563726, Length=276, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=31.6176470588235, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=31.7518248175182, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17562904, Length=277, Percent_Identity=28.5198555956679, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560332, Length=277, Percent_Identity=30.6859205776173, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=31.1475409836066, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=28.1853281853282, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17564282, Length=197, Percent_Identity=27.9187817258883, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=32.4427480916031, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17562908, Length=273, Percent_Identity=30.03663003663, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=29.2592592592593, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=26.9387755102041, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17551412, Length=279, Percent_Identity=28.673835125448, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538480, Length=277, Percent_Identity=29.6028880866426, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=27.9527559055118, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=26.1538461538462, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=26.530612244898, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=25.6603773584906, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=33.8582677165354, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=31.7073170731707, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=31.2, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=32.4, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=30.7692307692308, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=28.0487804878049, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=30.46875, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356301, Length=232, Percent_Identity=26.7241379310345, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358495, Length=226, Percent_Identity=29.646017699115, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737361, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=26.2626262626263, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=32.0158102766798, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 27068; Mature: 27068
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIALDQNDPFSLQGKRILVTGASSGIGRQIALSCAQIGAQLVITGRNEGRLAETFALLE CCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHC GTGHAQVIANLDKQEDIDHLVTSVGVLDGVAHAAGIARLAPFRMINRAHLDETFASNVYA CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLLTRGLLAKKRINANGSILLISAVGSHIGPVATAAYSASKAALLGAMRTLALEVAKHG HHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IRANCIVPGYVRTPMLEGLKQSGGSIDEHAKLTPLGLGEPEDVAYAAVFYLSDASRWVTR CEEEEEECCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHEEEEEEECCCCHHEEE NYFLVDGGLTVPMDVYA EEEEEECCCCCCEEECC >Mature Secondary Structure MNIALDQNDPFSLQGKRILVTGASSGIGRQIALSCAQIGAQLVITGRNEGRLAETFALLE CCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHC GTGHAQVIANLDKQEDIDHLVTSVGVLDGVAHAAGIARLAPFRMINRAHLDETFASNVYA CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLLTRGLLAKKRINANGSILLISAVGSHIGPVATAAYSASKAALLGAMRTLALEVAKHG HHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IRANCIVPGYVRTPMLEGLKQSGGSIDEHAKLTPLGLGEPEDVAYAAVFYLSDASRWVTR CEEEEEECCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHEEEEEEECCCCHHEEE NYFLVDGGLTVPMDVYA EEEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]