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The map label for this gene is ynfJ [C]

Identifier: 84624054

GI number: 84624054

Start: 2662582

End: 2663913

Strand: Direct

Name: ynfJ [C]

Synonym: XOO_2397

Alternate gene names: 84624054

Gene position: 2662582-2663913 (Clockwise)

Preceding gene: 84624053

Following gene: 84624055

Centisome position: 53.9

GC content: 63.81

Gene sequence:

>1332_bases
ATGTCACGATTTCGTCGCCCCGAGCACCTCGACCTTTTCACTCATCTCGCCAAGTGGCTGGTGATTGCCAGCATTGTCGC
GGCGCTGGCCGGCACCGCTTCGGCATTTTTCTTGTGGGCACTGGATTGGGCCACCAATTGGCGCCCGGCACATCCGCGCG
CGATTTGGCTGTTGCCGCTGGCCGGTTTTGCGGTCGGGCTGGTGTATCTGCTGCTGGGGAAGCAGGTGGATGCGGGCAAT
AACCTGATCATCGACGAAATCCAGGACCCCAAGAAGCTGGTGCCGCTGCGCATGGCGCCGCTGGTGATGGGAGGCACGGT
GGTCTCCCACCTGTTCGGCGCATCAGTCGGCCGCGAAGGCACCGCGGTGCAGATGGGTGCCGCACTCGCCGACCAGCTCA
CCCGCCTGCTGCGCCTGCGCAACGAAGACCGGCGCATGGTGCTGATGGCCGGCATCAGCGCCGGCTTCGCTTCGGTGTTC
GGCACCCCGTTGGCCGGTGCCATCTTCGGGTTGGAGGTGCTGGCCATCGGACGATTGCGCTACGACGCCCTGCTGCCCTG
CGCGGTGGCCGCCATCGTGGCCGACCAGGTCTGTCTGGCCTGGGGTATTCACCACATCCATTACCCGATCGGTCAAATCG
TCCCGGTCGGGATCGGCAGCGTACTGGCGGTCATGGCAGCCGGCATGCTGTTCGGTCTGGTCGGCATGCTGTTTGCCACC
GTGACCCATCGCCTGGGCAATGTGAGCAAACGCGCCATCGGCTACGCTCCGCTGCGCCTGCTCCTGGGCGGCTGCATCAT
CGCACTGGCGGTGTGGGGACTCGGCACGCAACGCTATATCGGTTTGGGAATTCCTGAGATTGTGCGCGCCTTCCACGAAC
CCATGGCGCCCTGGGATTTTCTGGGCAAGCTGTGCTTCACGGCCGTCTCGCTGGGAACCGGCTTCAAGGGCGGCGAGGTG
ACGCCACTGTTTTACATCGGCGCCACGCTGGGCAATGCGCTTGCACCGTTACTGCATCTGCCCTTTCCGATGTTGGCTGG
GATCGGTTTTGTGGCTCTATTTGCAGGCGCATCCAATACGCCGATTGCATCCACGCTCATGGCGGTCGAGCTGTTCGGTG
CCGATATCGCGCCGCTTGCCGCAATCGGTTGCATCACTGCCTATCTGTTTTCAGGCCATACCGGGATCTACCACGCGCAA
CGCATCGGTCACGGCAAGCACGATCGACACAGTGCGGGGCTGGAGGACACCCTGCGTCTTGCCGACCTGCAAGCACGGCG
GCGGCTCATCCGGCGCACGCCAGACAACGCTGCCAGCGAGAAGCGGACATGA

Upstream 100 bases:

>100_bases
ACGCCTACAAGAACTCTGGCTCGGTCCGGGGATTGTAGGCGTGTTCGTGCTCACATCTCCCTGCCGTGCCAGCCCTCATG
TCCACAGACGATAGGCTGCC

Downstream 100 bases:

>100_bases
GCCTGCCAGAGCACCCCAGCGTTCTGCGCCTGTACTTCGCCGCCGGCACCCGCGCCAGGCCTAGCCGGTTCTTGCACCGG
CTGGGCGCTCCGGCTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSRFRRPEHLDLFTHLAKWLVIASIVAALAGTASAFFLWALDWATNWRPAHPRAIWLLPLAGFAVGLVYLLLGKQVDAGN
NLIIDEIQDPKKLVPLRMAPLVMGGTVVSHLFGASVGREGTAVQMGAALADQLTRLLRLRNEDRRMVLMAGISAGFASVF
GTPLAGAIFGLEVLAIGRLRYDALLPCAVAAIVADQVCLAWGIHHIHYPIGQIVPVGIGSVLAVMAAGMLFGLVGMLFAT
VTHRLGNVSKRAIGYAPLRLLLGGCIIALAVWGLGTQRYIGLGIPEIVRAFHEPMAPWDFLGKLCFTAVSLGTGFKGGEV
TPLFYIGATLGNALAPLLHLPFPMLAGIGFVALFAGASNTPIASTLMAVELFGADIAPLAAIGCITAYLFSGHTGIYHAQ
RIGHGKHDRHSAGLEDTLRLADLQARRRLIRRTPDNAASEKRT

Sequences:

>Translated_443_residues
MSRFRRPEHLDLFTHLAKWLVIASIVAALAGTASAFFLWALDWATNWRPAHPRAIWLLPLAGFAVGLVYLLLGKQVDAGN
NLIIDEIQDPKKLVPLRMAPLVMGGTVVSHLFGASVGREGTAVQMGAALADQLTRLLRLRNEDRRMVLMAGISAGFASVF
GTPLAGAIFGLEVLAIGRLRYDALLPCAVAAIVADQVCLAWGIHHIHYPIGQIVPVGIGSVLAVMAAGMLFGLVGMLFAT
VTHRLGNVSKRAIGYAPLRLLLGGCIIALAVWGLGTQRYIGLGIPEIVRAFHEPMAPWDFLGKLCFTAVSLGTGFKGGEV
TPLFYIGATLGNALAPLLHLPFPMLAGIGFVALFAGASNTPIASTLMAVELFGADIAPLAAIGCITAYLFSGHTGIYHAQ
RIGHGKHDRHSAGLEDTLRLADLQARRRLIRRTPDNAASEKRT
>Mature_442_residues
SRFRRPEHLDLFTHLAKWLVIASIVAALAGTASAFFLWALDWATNWRPAHPRAIWLLPLAGFAVGLVYLLLGKQVDAGNN
LIIDEIQDPKKLVPLRMAPLVMGGTVVSHLFGASVGREGTAVQMGAALADQLTRLLRLRNEDRRMVLMAGISAGFASVFG
TPLAGAIFGLEVLAIGRLRYDALLPCAVAAIVADQVCLAWGIHHIHYPIGQIVPVGIGSVLAVMAAGMLFGLVGMLFATV
THRLGNVSKRAIGYAPLRLLLGGCIIALAVWGLGTQRYIGLGIPEIVRAFHEPMAPWDFLGKLCFTAVSLGTGFKGGEVT
PLFYIGATLGNALAPLLHLPFPMLAGIGFVALFAGASNTPIASTLMAVELFGADIAPLAAIGCITAYLFSGHTGIYHAQR
IGHGKHDRHSAGLEDTLRLADLQARRRLIRRTPDNAASEKRT

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=300, Percent_Identity=31.3333333333333, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 47242; Mature: 47110

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRRPEHLDLFTHLAKWLVIASIVAALAGTASAFFLWALDWATNWRPAHPRAIWLLPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEHHH
AGFAVGLVYLLLGKQVDAGNNLIIDEIQDPKKLVPLRMAPLVMGGTVVSHLFGASVGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
TAVQMGAALADQLTRLLRLRNEDRRMVLMAGISAGFASVFGTPLAGAIFGLEVLAIGRLR
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDALLPCAVAAIVADQVCLAWGIHHIHYPIGQIVPVGIGSVLAVMAAGMLFGLVGMLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTHRLGNVSKRAIGYAPLRLLLGGCIIALAVWGLGTQRYIGLGIPEIVRAFHEPMAPWDF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCHHH
LGKLCFTAVSLGTGFKGGEVTPLFYIGATLGNALAPLLHLPFPMLAGIGFVALFAGASNT
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PIASTLMAVELFGADIAPLAAIGCITAYLFSGHTGIYHAQRIGHGKHDRHSAGLEDTLRL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
ADLQARRRLIRRTPDNAASEKRT
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SRFRRPEHLDLFTHLAKWLVIASIVAALAGTASAFFLWALDWATNWRPAHPRAIWLLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEHHH
AGFAVGLVYLLLGKQVDAGNNLIIDEIQDPKKLVPLRMAPLVMGGTVVSHLFGASVGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
TAVQMGAALADQLTRLLRLRNEDRRMVLMAGISAGFASVFGTPLAGAIFGLEVLAIGRLR
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDALLPCAVAAIVADQVCLAWGIHHIHYPIGQIVPVGIGSVLAVMAAGMLFGLVGMLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTHRLGNVSKRAIGYAPLRLLLGGCIIALAVWGLGTQRYIGLGIPEIVRAFHEPMAPWDF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCHHH
LGKLCFTAVSLGTGFKGGEVTPLFYIGATLGNALAPLLHLPFPMLAGIGFVALFAGASNT
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PIASTLMAVELFGADIAPLAAIGCITAYLFSGHTGIYHAQRIGHGKHDRHSAGLEDTLRL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
ADLQARRRLIRRTPDNAASEKRT
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]