| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is oprP [H]
Identifier: 84623989
GI number: 84623989
Start: 2592586
End: 2593836
Strand: Direct
Name: oprP [H]
Synonym: XOO_2332
Alternate gene names: 84623989
Gene position: 2592586-2593836 (Clockwise)
Preceding gene: 84623987
Following gene: 84623990
Centisome position: 52.48
GC content: 62.75
Gene sequence:
>1251_bases ATGAAACTCGCTCCCACCCTGCTTGGTTCCGCGCTGCTGCTGGCACTCGCCGCTCCTGCAGCACACGCCGAAATCGCCAT CGATGTGATCGGCGGCTCGGAGGTCTCGCTGGAAGGCCTGGTCCAGGCCGACGGCAACTGGTTCCACAACGATGTCCAAG ACCTCAATGGCGCGATCGGCGCCAATGGTGACAACTCCGAATTCAGCATCCGTCGCGCCGAGCTGGTGCTCAAGGGCAAA GGCCCGGGCAATGTCGAGTGGGTGCTGGGTTACGATCCGAGCGTTCTGAAGCAGGTGACCATCAAAGGCACCACCGTCAA CAGCACCGGCCGTTTCCTGGATAACAACGTCAAGTACAAGTTCGGCGGCAACGCGAACAACTATCTGCAGATCGGTCAGT TCAAGCAGCCCAACAGCCTGGAAGAACTGTCCAGCACCAAGAACAACGATTTCGTCTCCAAGGCGTCGGTGACCAACACC TACGGCATCTCGCGCCGTCTGGGCGTGGCCTATGGCATGGGCGACACCAACTGGAGCGTGACCGCCAGTGCGTTCGGCCG CGAGTTGACCCGCAACCAGGCCCACGGCAGCGGCTATGGCGCGCGCGGCACCTGGGCGCCGATCAACGAGACCGGCAACG TGCTGCACTTCGGCCTCAGCTACCTGGCCTACGACACCGACGACGATAGCTTGCGCCTGCGCGCACGTCCGGACGCCGAC CTGGCCACCGTTCGCCTGATCGACAGCGGCGCCATAACCAATGTCGACAACGTCGGTGTTGCCGGTGCCGAGGCGATGTG GATCACCGGGCCGTTCAAGGTGCAGAGCGAGTATTTCCAGGAAAACGCCAATCGCATCGGCGCCAACGCACACGACTATA AGAGTGATGGCTGGTACGTCAGCGGCGTCTGGAACATCACCGGCGAAACCTGGGGCTACAAGGCCGGCGTGCCGACCACC CCGCTGCCCAACGAGCCGGCCTCGGGCATGTGGCAGCTGGCAGTGCGCTACGACACCCTGGACCTCAACGACGGCCACTT GGTGGCCAACGGCAACACGCCGTTCGTCGATGGCGTGCTTGGCGGCAAGATGAACATCTGGACGGTCGGCGCCAACTGGT ACTGGCGCTCCAACTTCAAGTTCGCCCTCAACTACGCCAAGGTCGACAGCAGCCGCTACAACAGCGCTACACGCGCGCTG GTCGACGACAACCCGTCGATCATCGAAGCGCGCGCGCAGTTCTACTGGTAA
Upstream 100 bases:
>100_bases TTTTTGGCAAAAATTGATGATGACGTTGCGGTCGTTTTGTCACATTAACGCAACTTTCACATCATAGCCTGCGCCCACTT TCTCAGGTCGCAAAGCATCT
Downstream 100 bases:
>100_bases ACGCATTGCCACCGCGTGCGCTCGGTCGAGCGCACGCGGTGACGGCCGCCACTTCCTTCCGGCCTGAATATCCGACGGCA CAACGCCGTCATGGCTTTGT
Product: polyphosphate-selective porin O
Products: NA
Alternate protein names: Outer membrane protein D1 [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL VDDNPSIIEARAQFYW
Sequences:
>Translated_416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL VDDNPSIIEARAQFYW >Mature_416_residues MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL VDDNPSIIEARAQFYW
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 45096; Mature: 45096
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIG CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCC ANGDNSEFSIRRAELVLKGKGPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYK CCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHEEEEEEECEEECCCCCEECCCEEEE FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDTNWSV ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE TASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCC LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYV EEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCCCEEE SGVWNITGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC GGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRALVDDNPSIIEARAQFYW CCCEEEEEECCCEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIG CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCC ANGDNSEFSIRRAELVLKGKGPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYK CCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHEEEEEEECEEECCCCCEECCCEEEE FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDTNWSV ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE TASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCC LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYV EEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCCCEEE SGVWNITGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC GGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRALVDDNPSIIEARAQFYW CCCEEEEEECCCEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]