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The map label for this gene is yccS [C]

Identifier: 84623961

GI number: 84623961

Start: 2563773

End: 2565278

Strand: Direct

Name: yccS [C]

Synonym: XOO_2304

Alternate gene names: 84623961

Gene position: 2563773-2565278 (Clockwise)

Preceding gene: 84623960

Following gene: 84623962

Centisome position: 51.9

GC content: 66.87

Gene sequence:

>1506_bases
ATGCTGCATGGCGAGCATCGCTCGCGTGCGATTGCGGTACAGAGCTTTCGCATCATCGCCGAGCTCTGCGATCGCGTGCG
GCTGGAGCTGCTGTCGCTGGCCGATGCCGAAACGCGCCTGACCGAATCACAAGCGCGCCAGGCGATCGAACGCGTGCTCG
AACGCAGCGCCATCGTGCTGGAACAGCTCGCACATGCGATGACCGTGGGCGAAGACCCGGTGGCAGCCAATGCGTCGATG
ACCGGTTTCGATGATCTGGTCGGTGCATTGGCACAGTTTCAGCACGGCAACGCCGATACCCGCGAACGCCACCTGGTGCG
CGTCGCCGCGCGTGCGCAAGGTTTGGGCGGCCAGCTACGTGCGTTGGTGCGTAATGCGCACTGGGCCAGCAGCCGTGGCG
AAATCCAGGCGCAACTGGCCGAAGCGCGCCTGCCGGCAGCGCTACGCCCGGCCGCGACCTGGGCCACCTTGCGGGCGAAT
CTGGATGTGTCGTCGGTGGCCTTCCGGCACGCCTTGCGGTGCGGTGTGTGCCTGGCACTGGCCATCGCCTTCCAGCGCTG
GCAACCGCTTCAACACGGCTTCTGGATTCCGATGACCACCGCCATCGTGCTCAAGCCGGATTTCGGCGGCACCTTCAGTT
TTGGCGCATTACGTGTCGCGGGTACCTTCGTCGGGCTGTTGCTGGCCACCTTGCTCGCGCACCTGGCCATGGACGGCGCC
AGCATCCGCCTGGTCTTGTTGACGCTGTTTTGCCTCGGGTTTCGTTTACTGACGCAGGTGAACTACGGCATCGGCGTGGC
GTTTCTGACCGGCATGCTGGTGCTGCTGCTCTCCTTCGAAGGCGTGTCGCCCGGCGCAGCGGTCGGCGCGCGGTTGCAAG
CCACCGTGGCCGGCAGCGCGCTGGCGCTGATCGCCTACGCGCTGTGGCCCACGCGCGAACGTCGGCAGATTCGCACCTCG
CTGGCGCACTTGCTCAGCGCGTATCGCGACTATTTGCGCCGTCTGTTACTCGGCCAGATGGACAACCTGGGCGATACCCG
CGCCGCCACGCGCGTAGCACGCACCAATGCGCAGGCCTCGATCGAGCGTTTGCGCGGCGAACCACGCAGCCGGCGCAATC
TGCAGGAACTCAAACTGGCCGAATCGCTGCTGGCCAATGGCAACCGGCTGATCCGCGCCACCTTGTTGCTGGAGGCGGTG
CTAAGCGACGGCCACCCGCTGCCCACGCTGGAGGCGTTGCCCGCCTTCGCGCAGCAGGCCGACCAGACGCTGTCCGAGCT
GATCGACTGCCTGCGCAACGGCGGCATTGCGGCTGCGGCCACCTTGCGCAATGCCGAGCGTCAGCTTTCCGATGCGCTGG
CCGCATTGCCCGACAGTTCGCCAACCACCGCCGCGCTCGCCGAGCCCATCGACCGCGTCACCGACAGCATCGGCACACTC
ACCCATTTGCTGCGCCCTGCCCTGCCCTGCCCGACCGGCCTGGGCCGAGGTGCCAGCCCTGCATGA

Upstream 100 bases:

>100_bases
AGCGTTTCGCACTGGCGGAGTTGATGCGCCAACTGGCCGGCAGCGCCCGGAGGCCAGCGCGGCGGCGCCGGCAACGCAGG
AAGTGCTCGATGCGATGGTG

Downstream 100 bases:

>100_bases
CGGCGCGCATGATGCCGGCGGGTAAACTGCTGGCCTGATCCGTGTTGCGAGCCCGACGATGACCGACCTGCTGTCCCGCG
CCCATGCCGATGCCCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAETRLTESQARQAIERVLERSAIVLEQLAHAMTVGEDPVAANASM
TGFDDLVGALAQFQHGNADTRERHLVRVAARAQGLGGQLRALVRNAHWASSRGEIQAQLAEARLPAALRPAATWATLRAN
LDVSSVAFRHALRCGVCLALAIAFQRWQPLQHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGA
SIRLVLLTLFCLGFRLLTQVNYGIGVAFLTGMLVLLLSFEGVSPGAAVGARLQATVAGSALALIAYALWPTRERRQIRTS
LAHLLSAYRDYLRRLLLGQMDNLGDTRAATRVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRATLLLEAV
LSDGHPLPTLEALPAFAQQADQTLSELIDCLRNGGIAAAATLRNAERQLSDALAALPDSSPTTAALAEPIDRVTDSIGTL
THLLRPALPCPTGLGRGASPA

Sequences:

>Translated_501_residues
MLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAETRLTESQARQAIERVLERSAIVLEQLAHAMTVGEDPVAANASM
TGFDDLVGALAQFQHGNADTRERHLVRVAARAQGLGGQLRALVRNAHWASSRGEIQAQLAEARLPAALRPAATWATLRAN
LDVSSVAFRHALRCGVCLALAIAFQRWQPLQHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGA
SIRLVLLTLFCLGFRLLTQVNYGIGVAFLTGMLVLLLSFEGVSPGAAVGARLQATVAGSALALIAYALWPTRERRQIRTS
LAHLLSAYRDYLRRLLLGQMDNLGDTRAATRVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRATLLLEAV
LSDGHPLPTLEALPAFAQQADQTLSELIDCLRNGGIAAAATLRNAERQLSDALAALPDSSPTTAALAEPIDRVTDSIGTL
THLLRPALPCPTGLGRGASPA
>Mature_501_residues
MLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAETRLTESQARQAIERVLERSAIVLEQLAHAMTVGEDPVAANASM
TGFDDLVGALAQFQHGNADTRERHLVRVAARAQGLGGQLRALVRNAHWASSRGEIQAQLAEARLPAALRPAATWATLRAN
LDVSSVAFRHALRCGVCLALAIAFQRWQPLQHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGA
SIRLVLLTLFCLGFRLLTQVNYGIGVAFLTGMLVLLLSFEGVSPGAAVGARLQATVAGSALALIAYALWPTRERRQIRTS
LAHLLSAYRDYLRRLLLGQMDNLGDTRAATRVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRATLLLEAV
LSDGHPLPTLEALPAFAQQADQTLSELIDCLRNGGIAAAATLRNAERQLSDALAALPDSSPTTAALAEPIDRVTDSIGTL
THLLRPALPCPTGLGRGASPA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 53821; Mature: 53821

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAETRLTESQARQAIERVLERSAIVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLAHAMTVGEDPVAANASMTGFDDLVGALAQFQHGNADTRERHLVRVAARAQGLGGQLR
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
ALVRNAHWASSRGEIQAQLAEARLPAALRPAATWATLRANLDVSSVAFRHALRCGVCLAL
HHHHHHHCCCCCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AIAFQRWQPLQHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGA
HHHHHHCCHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIRLVLLTLFCLGFRLLTQVNYGIGVAFLTGMLVLLLSFEGVSPGAAVGARLQATVAGSA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LALIAYALWPTRERRQIRTSLAHLLSAYRDYLRRLLLGQMDNLGDTRAATRVARTNAQAS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IERLRGEPRSRRNLQELKLAESLLANGNRLIRATLLLEAVLSDGHPLPTLEALPAFAQQA
HHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DQTLSELIDCLRNGGIAAAATLRNAERQLSDALAALPDSSPTTAALAEPIDRVTDSIGTL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
THLLRPALPCPTGLGRGASPA
HHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAETRLTESQARQAIERVLERSAIVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLAHAMTVGEDPVAANASMTGFDDLVGALAQFQHGNADTRERHLVRVAARAQGLGGQLR
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH
ALVRNAHWASSRGEIQAQLAEARLPAALRPAATWATLRANLDVSSVAFRHALRCGVCLAL
HHHHHHHCCCCCCHHHHHHHHHHCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AIAFQRWQPLQHGFWIPMTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGA
HHHHHHCCHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SIRLVLLTLFCLGFRLLTQVNYGIGVAFLTGMLVLLLSFEGVSPGAAVGARLQATVAGSA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LALIAYALWPTRERRQIRTSLAHLLSAYRDYLRRLLLGQMDNLGDTRAATRVARTNAQAS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IERLRGEPRSRRNLQELKLAESLLANGNRLIRATLLLEAVLSDGHPLPTLEALPAFAQQA
HHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DQTLSELIDCLRNGGIAAAATLRNAERQLSDALAALPDSSPTTAALAEPIDRVTDSIGTL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
THLLRPALPCPTGLGRGASPA
HHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]