| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is can [H]
Identifier: 84623958
GI number: 84623958
Start: 2561832
End: 2562494
Strand: Direct
Name: can [H]
Synonym: XOO_2301
Alternate gene names: 84623958
Gene position: 2561832-2562494 (Clockwise)
Preceding gene: 84623957
Following gene: 84623959
Centisome position: 51.86
GC content: 60.48
Gene sequence:
>663_bases ATGAACGAACTCAATCATTTACTCGAAAACAACCGCGCATGGTCCGAGCGCATCCGCCGCGAAGATCCCGAGTTCTTTTC CAAACTGTCGACCCAGCAGACCCCGGAATATCTGTGGATCGGTTGCTCCGATTCGCGCGTGCCGGCCAACCAGATCATCG ACATGGCGCCGGGCGAAGTCTTCGTCCACCGTAATATCGCCAACGTGGTGGTGCATACCGATCTGAATTGCCTGTCGGTG ATCCAGTTCGCGGTGGACGTACTCAAGGTCAAACACGTGCTGGTGGTTGGCCATTACGGCTGCGGCGGTGTGTTCGCCAG CCTGACCCAAAAGCGTATGGGTTTGGTCGACAACTGGATCCGCCACGTCACCGACGTGGCCGACAAGCACGAAGCCTGCC TGCACGACGCCGGCGATCTGCCGATACAGCACGCGCGCCTGTGCGAGCTCAACGTGCTCGAACAGGTGGTCAATGTGTGC CGCACCACCATCGTGCGCGATGCGTGGGAGCGCGGTCAGGAACTTTACGTGCATGGCTGGGTGTATAGCCTGCGCGATGG CCGCGCACACGACCTGGGCATGTCGATTGACCGCCACGAACTGGTGCAAGAGCGCTACGATGCGGCGCTGGCGAAGATCC AGGCTGATCGCGCCGAACGCTGA
Upstream 100 bases:
>100_bases ATGGCGCAGCCTGAGCGCAGCGCACCGAGCGTTTTTCTGCATCACGGTTTTAGGCCTCCCTTGCCCTCTCCTCTCCCTCT GCCTCTGGAAAACTGCGCGC
Downstream 100 bases:
>100_bases GCCGCACGCAACTGCATGGCCAACCGCCGCATCCATGTGAGGCGAGCGGTTGGCTATGCTGGACACCTTCTCCGCCGAGG AACCCTTGATGCTGATCCCG
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNIANVVVHTDLNCLSV IQFAVDVLKVKHVLVVGHYGCGGVFASLTQKRMGLVDNWIRHVTDVADKHEACLHDAGDLPIQHARLCELNVLEQVVNVC RTTIVRDAWERGQELYVHGWVYSLRDGRAHDLGMSIDRHELVQERYDAALAKIQADRAER
Sequences:
>Translated_220_residues MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNIANVVVHTDLNCLSV IQFAVDVLKVKHVLVVGHYGCGGVFASLTQKRMGLVDNWIRHVTDVADKHEACLHDAGDLPIQHARLCELNVLEQVVNVC RTTIVRDAWERGQELYVHGWVYSLRDGRAHDLGMSIDRHELVQERYDAALAKIQADRAER >Mature_220_residues MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNIANVVVHTDLNCLSV IQFAVDVLKVKHVLVVGHYGCGGVFASLTQKRMGLVDNWIRHVTDVADKHEACLHDAGDLPIQHARLCELNVLEQVVNVC RTTIVRDAWERGQELYVHGWVYSLRDGRAHDLGMSIDRHELVQERYDAALAKIQADRAER
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=221, Percent_Identity=47.9638009049774, Blast_Score=235, Evalue=1e-63, Organism=Escherichia coli, GI1786534, Length=169, Percent_Identity=33.7278106508876, Blast_Score=95, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324292, Length=192, Percent_Identity=31.7708333333333, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 25155; Mature: 25155
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPANQIIDMAPGEV CCHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCE FVHRNIANVVVHTDLNCLSVIQFAVDVLKVKHVLVVGHYGCGGVFASLTQKRMGLVDNWI EEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH RHVTDVADKHEACLHDAGDLPIQHARLCELNVLEQVVNVCRTTIVRDAWERGQELYVHGW HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE VYSLRDGRAHDLGMSIDRHELVQERYDAALAKIQADRAER EEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPANQIIDMAPGEV CCHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCE FVHRNIANVVVHTDLNCLSVIQFAVDVLKVKHVLVVGHYGCGGVFASLTQKRMGLVDNWI EEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH RHVTDVADKHEACLHDAGDLPIQHARLCELNVLEQVVNVCRTTIVRDAWERGQELYVHGW HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE VYSLRDGRAHDLGMSIDRHELVQERYDAALAKIQADRAER EEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]