| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623939
Identifier: 84623939
GI number: 84623939
Start: 2540954
End: 2541706
Strand: Direct
Name: 84623939
Synonym: XOO_2282
Alternate gene names: NA
Gene position: 2540954-2541706 (Clockwise)
Preceding gene: 84623938
Following gene: 84623953
Centisome position: 51.43
GC content: 63.21
Gene sequence:
>753_bases ATGCAACGTTTCGAGGAATCTCCCATGGGCATCTTGATCTACCTGGTGCCTGCGTCCGCACTGTGGGCGCTGATCGCCAC CGCACTGGCATTCGTGCGCGGTCGCCAGTTGCGTGCCGAATCGAGCGAGCTTGCCAGCACGCAGGACCGCCTCGGTAGCT ATCAGGCGGCGCTGTCGCAACAGAAGGCGCGTGCGGCGGCCACCACGCTGGAACTGGAATCGTTGCAGCGCAGCTATGCC GTGCTCAAGCAATCGCTGGAGCAGCAGGAGCAGAACGCCTCGGAGCAGCAGGCGGCCACTGCCGGCCAGGTGATTCCGAT GGTGCTGGTGCAGCGGTTGGATATCGCCAGCGAGATCGGCACGCTCTTCGGGCATGTCGCACGCGTGGCGCGCATCCTGC GTCGCTACAGCGCCTACAGCCGCGGCCACAATGCACCCGAGCCGGCGACCGCGCGCTACGACCTGCACTGGCTTGCCGAC TGTTTGCACAGCTTCGATCAGCTGGGTCACGCACTGGTGCACGGCAATGTTGCTGCACTGATCACGGCTTGCCAGGATCT GCTGTCGATGTATGAGCATTACTTGAAGGATGGCTCCGGCTACAACAGCCGCGATACCTTCCAGCGATTGAGTCACGATG TGCCGCTGTCCGAGGCCACCGATGCGATCCGCTCGATCATCGTCAAGGCGACGCTGGCGCAGGATGTGCAAGATGCGGTG CAGAACGACGAGGTGACCGCGAACGTTGGGTGA
Upstream 100 bases:
>100_bases ACGTCGTGGCCGATGGCGGGACGGCAGCATTCCTGTTGGTGACCTTTGTCGCCGCACAAACCGAGATCCCTCAAGAACGT CATTGTCAGGCCGACAAGAT
Downstream 100 bases:
>100_bases GTTGTCCAAGCGCTTCATCGCGCAGCGCCCAACCCGGCTTGTCGGCCTCGACGCCCGACACCATCGCGACCACCGCCTTG CTGTCCTTGCGACGTCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQRFEESPMGILIYLVPASALWALIATALAFVRGRQLRAESSELASTQDRLGSYQAALSQQKARAAATTLELESLQRSYA VLKQSLEQQEQNASEQQAATAGQVIPMVLVQRLDIASEIGTLFGHVARVARILRRYSAYSRGHNAPEPATARYDLHWLAD CLHSFDQLGHALVHGNVAALITACQDLLSMYEHYLKDGSGYNSRDTFQRLSHDVPLSEATDAIRSIIVKATLAQDVQDAV QNDEVTANVG
Sequences:
>Translated_250_residues MQRFEESPMGILIYLVPASALWALIATALAFVRGRQLRAESSELASTQDRLGSYQAALSQQKARAAATTLELESLQRSYA VLKQSLEQQEQNASEQQAATAGQVIPMVLVQRLDIASEIGTLFGHVARVARILRRYSAYSRGHNAPEPATARYDLHWLAD CLHSFDQLGHALVHGNVAALITACQDLLSMYEHYLKDGSGYNSRDTFQRLSHDVPLSEATDAIRSIIVKATLAQDVQDAV QNDEVTANVG >Mature_250_residues MQRFEESPMGILIYLVPASALWALIATALAFVRGRQLRAESSELASTQDRLGSYQAALSQQKARAAATTLELESLQRSYA VLKQSLEQQEQNASEQQAATAGQVIPMVLVQRLDIASEIGTLFGHVARVARILRRYSAYSRGHNAPEPATARYDLHWLAD CLHSFDQLGHALVHGNVAALITACQDLLSMYEHYLKDGSGYNSRDTFQRLSHDVPLSEATDAIRSIIVKATLAQDVQDAV QNDEVTANVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27435; Mature: 27435
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFEESPMGILIYLVPASALWALIATALAFVRGRQLRAESSELASTQDRLGSYQAALSQ CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKARAAATTLELESLQRSYAVLKQSLEQQEQNASEQQAATAGQVIPMVLVQRLDIASEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFGHVARVARILRRYSAYSRGHNAPEPATARYDLHWLADCLHSFDQLGHALVHGNVAAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITACQDLLSMYEHYLKDGSGYNSRDTFQRLSHDVPLSEATDAIRSIIVKATLAQDVQDAV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNDEVTANVG CCCCCCCCCC >Mature Secondary Structure MQRFEESPMGILIYLVPASALWALIATALAFVRGRQLRAESSELASTQDRLGSYQAALSQ CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKARAAATTLELESLQRSYAVLKQSLEQQEQNASEQQAATAGQVIPMVLVQRLDIASEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFGHVARVARILRRYSAYSRGHNAPEPATARYDLHWLADCLHSFDQLGHALVHGNVAAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITACQDLLSMYEHYLKDGSGYNSRDTFQRLSHDVPLSEATDAIRSIIVKATLAQDVQDAV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QNDEVTANVG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA