Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is czcB [H]

Identifier: 84623912

GI number: 84623912

Start: 2501990

End: 2503105

Strand: Direct

Name: czcB [H]

Synonym: XOO_2255

Alternate gene names: 84623912

Gene position: 2501990-2503105 (Clockwise)

Preceding gene: 84623910

Following gene: 84623913

Centisome position: 50.65

GC content: 66.13

Gene sequence:

>1116_bases
ATGTCGTCCCTCTTCCTGCGTTCTACGCTGGCAGCTGCCTGCGTTGGCAGCCTGCTTGCTGGCTGCGGTGCCACCCCGCC
ACCGCCGGCTCCCTCGCCGCTGCTCATCCACACCAGCACCCAGGTGAGCGTGCCGGCGCACTCGCCGTTGCGTGCCAGCC
TGCGCGTGCAGGCAGTGCGCAGCCAGCCCATCGCCCCCATGGTGCAGATGCCGGCGGTGATCGATGTGTTGCCCGAGCGG
CTGGTGCGTGTCGTGCCGCCGTTGGCCGGGCGGGTGGTCGCATTGCCCAAGACCCTGGGCGACACCGTGCGTGCAGGCGA
TGTGCTGTGCGTGCTCGATTCCGCCGAACTTGCCACCGCCTACAGCGATGCCGGCAAGGCGCGCGCCACGCTGCAACAAG
CGCGCCTGGAACTGGCTCGGCAGAAGGTGCTAGCGGCAGACAGCATTGCAGCAGCACGCGATCTGCAGGCGGCGCAGCAG
GCTTTCGACAGCGCGCAGAACGATGCGCGTGCGGCCAGCGATCGTCTGGCCCAGCTGGGTGTGGCCGCACAAGCAACATC
GCATCGACGCTATGTCTTGCGTGCGCCCATTGCCGGCCGCGTGGTGGACCTGAGCGCTGCGCTGGGGGGCTTCTGGAACG
ACACGTCAGCGCCACTGATGACGGTGGCCGATATCTCGCGGGTCTGGCTGACCGCCAGCGTGCCGGAACGCGAGATCGGC
CAGGTCTTCGAAGGGCAGCAGGTCACCGCCAGCCTGGATGCCTACCCGGGCCAACACTTCACCGGCCAGGTACAACACCT
GGACGATCTGCTCGACCCCACCACCCGTACGTTGAAGGTCAGGGTGGCATTGAACAACCACGATGGCCTGCTCAAGCCGG
GCATGTTCGCGCGCGCCCAGTTTCAAGCACGCCCACAGCAGGCGTTGCTGATTCCCGACAGCGCGCTGTTGCAGATGGGG
CTGTATACGCGGGTATTTATCGAAACCGCCCCGTTCGTTTATCGCTCGCGCATTGTCGCCACCGGCCGCGCTGTGGATGG
GTCTACCGAAATCCTGTCCGGCTTGAAGGCAGGCGAGCGTGTGGTGATCAAGGACGGAGCCTTGCTCAATGATTGA

Upstream 100 bases:

>100_bases
CGGCAGCGAGCGTGTCTGCATCGCCAATGCAAGCGCTGCCCGCTTTCGTGGGTCGCGGACTGCATGTGCAACGCCTTCCC
CTCCCCGCTCGAGTCACAGC

Downstream 100 bases:

>100_bases
GTCGATCATCACCACCTGCTTCCAGCGTCGCGGCATCGTCTGGCTGGTCTTCGTACTCATTGCGTTATACGGCACATGGA
GCTGGACGCAGCTGCCGGTG

Product: cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPER
LVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQ
AFDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG
QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMG
LYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND

Sequences:

>Translated_371_residues
MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPER
LVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQ
AFDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG
QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMG
LYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND
>Mature_370_residues
SSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPERL
VRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQA
FDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIGQ
VFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMGL
YTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=338, Percent_Identity=28.698224852071, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786787, Length=175, Percent_Identity=34.2857142857143, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789929, Length=308, Percent_Identity=26.9480519480519, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081796, Length=312, Percent_Identity=28.2051282051282, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39316; Mature: 39184

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCHHHHHHEEHH
SQPIAPMVQMPAVIDVLPERLVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHCCCCEEEEECCHHHHHH
YSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG
HHHHHCCCCEEEEECCCCCCEEEHHHHHCCCCCCCCCCEEHHHHHHHEEEECCCCHHHHH
QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQ
HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH
FQARPQQALLIPDSALLQMGLYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGER
HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCHHHHHHHHCCCCE
VVIKDGALLND
EEEECCCCCCC
>Mature Secondary Structure 
SSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCHHHHHHEEHH
SQPIAPMVQMPAVIDVLPERLVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHCCCCEEEEECCHHHHHH
YSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG
HHHHHCCCCEEEEECCCCCCEEEHHHHHCCCCCCCCCCEEHHHHHHHEEEECCCCHHHHH
QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQ
HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH
FQARPQQALLIPDSALLQMGLYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGER
HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCHHHHHHHHCCCCE
VVIKDGALLND
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]