Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84623856

Identifier: 84623856

GI number: 84623856

Start: 2438429

End: 2438809

Strand: Direct

Name: 84623856

Synonym: XOO_2199

Alternate gene names: NA

Gene position: 2438429-2438809 (Clockwise)

Preceding gene: 84623854

Following gene: 84623857

Centisome position: 49.36

GC content: 62.73

Gene sequence:

>381_bases
ATGTCGGTGTTGCGTGGAGCTCGGGTACTCGTGGTCGAAAACGATGACATGAATGCCATGCTGCTCGACCTGCAGCTTGT
TCAGGCGGGCGCTGTCGTCATGGGCCCGGTCGGCAAAGTGCACGATGCCTTGCAGCTGATCAGCGCCGACGCGCCGGATC
TCGCAGTGCTGGACTATCGCCTGGGCAACGGCGAAACCAGCGAACCGGTCGCACGCCTGTTGTCCAAGCGTGGCATCCCA
TTCGTACTGGCAACCGGCGTTGCCATCGGCAGCATTCCGAGCGGTTTCGAGCGTGGCGTCATTCTGACCAAGCCCTACCT
GTCCGAAGATCTGGTTGGCGCGTTGTTCAGGGCGCGCGAGTCGCGCGGCGCCAAGAGCTGA

Upstream 100 bases:

>100_bases
AGTGTCAGTTCGCGCCTGACGAATTCAGGTGGAGGCGGGGTCTGCAGCGTTGCGTACAGGCAGTCTCGATATACTGGCCG
ACTTGGTGAAGGAGTAAGCA

Downstream 100 bases:

>100_bases
GCCGCGTCACCTGCTGCGACGCTAGCCTGCCACTGTGCAGGTGCCAGGGCCGGCGACATGCCCCCCCCTGTTACCGCTCT
TTCCTCCCGTCCGCGGCGTG

Product: two-component system regulatory protein

Products: NA

Alternate protein names: Two-Component System Regulatory Protein; Response Regulator Receiver; Two-Component Response Regulator; PAS-Family Sensor Histidine Kinase/Receiver Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component System Response Regulator Protein; Two Component-Response Regulator Receiver; Response Regulator/Sensor Histidine Kinase; CheY-Like Response Regulator; Two-Component Response Regulator Protein; Signal Transduction Histidine Kinase; Two Component Response Regulator; Bacteriophytochrome Protein

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIP
FVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS

Sequences:

>Translated_126_residues
MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIP
FVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS
>Mature_125_residues
SVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIPF
VLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13285; Mature: 13153

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYR
CCCCCCCEEEEEECCCCCEEEEHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEE
LGNGETSEPVARLLSKRGIPFVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARE
CCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
SRGAKS
HCCCCC
>Mature Secondary Structure 
SVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYR
CCCCCCEEEEEECCCCCEEEEHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEE
LGNGETSEPVARLLSKRGIPFVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARE
CCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
SRGAKS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA