Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 84623741

GI number: 84623741

Start: 2306982

End: 2307596

Strand: Direct

Name: pssA [H]

Synonym: XOO_2084

Alternate gene names: 84623741

Gene position: 2306982-2307596 (Clockwise)

Preceding gene: 84623739

Following gene: 84623742

Centisome position: 46.7

GC content: 64.55

Gene sequence:

>615_bases
ATGAAACGCCATTTTTCGATGCTGCGCGATTTCCAACTCGCGGACTGGTTCACACTTGCCAACGCTTTCTGCGGCACCGG
CGCGGTGTTTGCGGCGATGCGCTTCCTGCAAGAGGAGCATCGTGGCGATCTGTTGCTGGGGATGGCGCTGATTCCGCTGG
CATTCGTGTTCGATGCGCTGGACGGGCACGTGGCGCGCTGGCGCAAGGCGTCTTCCACCCTGGGCCGCGAGCTGGATTCG
CTGGCGGATGTGATTTCGTTTGGCGTGGCGCCAGCGGCGCTGGGGTATGCCTGCGGCATGCGTGGCGGCTGGGACTGGCT
GGTGCTGAGCTATTTCGTCTGCTGCGGCGTGAGCCGGCTGGCGCGCTACAACGTCACCGCCGAGGAGATCGCCGGGGAGG
CCGACAAGGTGCCGTATTTCGAAGGCACGCCCATTCCCACCAGCCTGCTGCTGGTGATCCTGCTCGCGGTTGCCGCCAGC
ATCGGGCATATCGGCGAGACCTTGTGGTGGGGCCAGTGGCAGCTCGGTCCGTGGCAGTTCCACCCGCTGGTGCTGCTGTT
TGCGGTGTCCGGCTCGCTGATGATCAGCAAGACGCTGCGCATCCCCAAACTCTGA

Upstream 100 bases:

>100_bases
GAAGCGGTCACGCGAATCGCCAGCCTAGCCGAGTGTGGCGAAACGGTCGCCTGCATGGCGCGCGCGCTACCCTTGGTGTC
TTGCCCACCTCAGGCTCCGC

Downstream 100 bases:

>100_bases
GCGGCACGCTGGGATGCACGCGGTAGGATGGCTCGGTGAACGGTCACGGGACGGAATGATGGCAAGCAGCGGTTCGGACA
ACGGCAATTTCGACGACAAG

Product: CDP-diacylglycerol-serine o-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS
LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS
IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL

Sequences:

>Translated_204_residues
MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS
LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS
IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL
>Mature_204_residues
MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS
LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS
IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=205, Percent_Identity=42.4390243902439, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 22478; Mature: 22478

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDAL
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DGHVARWRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAASIGHIGETLWWGQWQLGPWQF
HHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
HPLVLLFAVSGSLMISKTLRIPKL
HHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDAL
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DGHVARWRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAASIGHIGETLWWGQWQLGPWQF
HHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
HPLVLLFAVSGSLMISKTLRIPKL
HHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]