| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623699
Identifier: 84623699
GI number: 84623699
Start: 2262238
End: 2262657
Strand: Direct
Name: 84623699
Synonym: XOO_2042
Alternate gene names: NA
Gene position: 2262238-2262657 (Clockwise)
Preceding gene: 84623698
Following gene: 84623706
Centisome position: 45.79
GC content: 62.86
Gene sequence:
>420_bases ATGACCCTGTTCACGCTCTATCTGCACCACCACCGCGAAGACTGGCCGGGACGACGCGCTTACATCGCCAAAGAGCTCAA GCGACTGGCGCCGGATGTGATTGGGCTGCAGGAGGTCATCGAACGCCGCGGCAGCCTGGAAAATCAGGCGGCCTGGCTGG CGCGCAAGCTCGGCGATGACTGCACCTTCGCCTCGGTCGATCCGGTCGGCGCGCCCAAACGTGACGGCAATGCGTTGCGG ATTCAGCGCCACTTTGCTCAACCGTGCAGGCGGTTGAAGATCTGCACGCCGGCCAGCCATACACCGGCCATGCTGCCGAA ATTGGTCAGCAGAAATGTCAGCACCACGCGTGAGACGCGATTGCGGTACCAGCCACGCAGCGTCTGCGCATCGTCGCGCA GCGATAGGAAATCGCCATAG
Upstream 100 bases:
>100_bases GCTGACTCAGGGCGTCAATCCTGCGCAAGCTGTGCAGCGCGGCAAGACCGATCGGCCCGCGCCAGCTGCCGCGTAGTTAC CCAACGCAGCGGCGCGCGAG
Downstream 100 bases:
>100_bases GCCGGCTTGCGCATGTGCACTTCGACCAGTGCCGCAAATGCACCTGTTGGCACGCTCAGGCGGAACGGCTTGAACGGCGC CACGACGGCAGCGGTGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTLFTLYLHHHREDWPGRRAYIAKELKRLAPDVIGLQEVIERRGSLENQAAWLARKLGDDCTFASVDPVGAPKRDGNALR IQRHFAQPCRRLKICTPASHTPAMLPKLVSRNVSTTRETRLRYQPRSVCASSRSDRKSP
Sequences:
>Translated_139_residues MTLFTLYLHHHREDWPGRRAYIAKELKRLAPDVIGLQEVIERRGSLENQAAWLARKLGDDCTFASVDPVGAPKRDGNALR IQRHFAQPCRRLKICTPASHTPAMLPKLVSRNVSTTRETRLRYQPRSVCASSRSDRKSP >Mature_138_residues TLFTLYLHHHREDWPGRRAYIAKELKRLAPDVIGLQEVIERRGSLENQAAWLARKLGDDCTFASVDPVGAPKRDGNALRI QRHFAQPCRRLKICTPASHTPAMLPKLVSRNVSTTRETRLRYQPRSVCASSRSDRKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15871; Mature: 15740
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFTLYLHHHREDWPGRRAYIAKELKRLAPDVIGLQEVIERRGSLENQAAWLARKLGDD CEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC CTFASVDPVGAPKRDGNALRIQRHFAQPCRRLKICTPASHTPAMLPKLVSRNVSTTRETR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHH LRYQPRSVCASSRSDRKSP HHCCHHHHHHCCCCCCCCC >Mature Secondary Structure TLFTLYLHHHREDWPGRRAYIAKELKRLAPDVIGLQEVIERRGSLENQAAWLARKLGDD EEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC CTFASVDPVGAPKRDGNALRIQRHFAQPCRRLKICTPASHTPAMLPKLVSRNVSTTRETR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHH LRYQPRSVCASSRSDRKSP HHCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA