Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is yfjG [C]

Identifier: 84623562

GI number: 84623562

Start: 2104211

End: 2104642

Strand: Direct

Name: yfjG [C]

Synonym: XOO_1905

Alternate gene names: 84623562

Gene position: 2104211-2104642 (Clockwise)

Preceding gene: 84623556

Following gene: 84623563

Centisome position: 42.59

GC content: 64.35

Gene sequence:

>432_bases
ATGCCTACCATCCGTCGCAGCGCCCTGGTCGAACACAGCGCCACCTGCATGTTCGATCTGGTCAATGATGTCGAAGCCTA
TCCGCGCCGCTTCGGCTGGTGCGACGCTGCCCATGTGCTCGAAAAGGACCAGGCGCATGTCGTGGCGCGCCTGGATCTGG
GGCTGGGGTCGTTCCGCACCTGGTTCACCACCGAGAACATCCTTGAGCGCCCCGAGCGCATCGTCATGCACTTGCGCGAG
GGCCCGTTCAAGCGATTGGAAGGCCTGTGGGAATTCCAGGCGCTGAGCGAGAACGCTTGCAAGGTGAGTCTGACCCTGGA
ACTGGAGACCAGCTCGCGCTTGCTGGGCCCTGCGCTGGCGCTGGGGTTCCAGGGCCTGGCCGATCGCATGGTCAACGATT
TCGTACGCGTCGCCGACCGCGGCGAGGTCTAG

Upstream 100 bases:

>100_bases
TCGCGCCGTTTGCTTTATCCTTGGTGGGTTTCTTGTTCATCCGCCCATTGTCGCCGATTCGGCGTCGTCAAACGATCTTC
CGTCTTTCACAAGTTAGCGA

Downstream 100 bases:

>100_bases
GCAGCGCTGCCGTATGCGCATCGAGGTCGTGCTGGCCTGGCCGGATCACTACAGTGCGGTGCAACTGGACTTGCCCGACG
GCGCAACGGTGGCAGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLRE
GPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV

Sequences:

>Translated_143_residues
MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLRE
GPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV
>Mature_142_residues
PTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLREG
PFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Escherichia coli, GI1788972, Length=134, Percent_Identity=38.8059701492537, Blast_Score=106, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 16231; Mature: 16100

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCCCCHHH
WFTTENILERPERIVMHLREGPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALA
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHH
LGFQGLADRMVNDFVRVADRGEV
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCCCCHHH
WFTTENILERPERIVMHLREGPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALA
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHH
LGFQGLADRMVNDFVRVADRGEV
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA