| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is ampC [C]
Identifier: 84623549
GI number: 84623549
Start: 2090372
End: 2091106
Strand: Direct
Name: ampC [C]
Synonym: XOO_1892
Alternate gene names: 84623549
Gene position: 2090372-2091106 (Clockwise)
Preceding gene: 84623548
Following gene: 84623551
Centisome position: 42.31
GC content: 58.23
Gene sequence:
>735_bases ATGGGCATGTGGTCGGCAGCGATGGTATGCAGGCAAATGGATCTGCTCGATGGCAGGTCACCAGTGCAGCATCAAGTGCA ATCTCGTCGATTGCGTCAGCCGTCCAAACGTCTGCTGTGCTGGCTTGCCGCTGCGGGGATGCTTGTCGCGCAGGTGTGCT GTTTTCCGGCGATCGCCGCGCCTGCGTCGCTTGAGGACGCGTTGACCCAACAGCTGCATGTCAACCGTCAGCGTTGCGGC ATTGTCGGGCAGGCGGTGTCTGTTGTGCACAACGGCAAGCCGCTATTTGGCGGCGTCGATGGGCTTGCTGGTATGGACAT GAAGCAGCCGGTAACGCCAGAGCAGATCTTTCCTGCGTTTTCGGTGAGCAAGCTGTTTGTGAGCACGCTGATCATGCAAC TGATCGATCCGGGTCAGCCGGCAAGACAGTATTTGCCCGGATTGCTGCAGCGCTGGGAACACATCAGCCTTGCGCAACTG CTCAAGCATACCTCTGGCCTGCCAGCGTATTTCGAGCCGTCGCAGATGAGCGGCACGGATAAAGCCAGCGCTTCATTTCC AGCAACTGCGCAAGCGCTGTTAGAAGTGTTGGTTGCGAGACCGTTGCTTTGTGTGCCTGGCAGCGAAACGCGCTATGTCA ACACCAACGACGTCGTTCTTGCGCAGCTCTTGCAGGCGCATGACCGCATGCCCTGTGCACAGGTGGCATCAGAGCGAATC ATTAGGGCCTGTTAA
Upstream 100 bases:
>100_bases GGCCGTTCGGCGCCGGTGCCGGGAGTGCAGCGGCGGCAGCGGGGCACTGAGCCCCTGTTGAGGGGCTGCTAGACTTGCGC CGTCAACGCAGGAGCGGGCG
Downstream 100 bases:
>100_bases CACATTCGAAGCCCATCAACGACCAGAACGAAGCTGAGGAAGCCAAGGAACATGACATCCAGCTGCTCGAAGCGCGTGAA AATCCGTCGGTAGCCCTTCA
Product: hypothetical protein
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: Serine-Type D-Ala-D-Ala Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase; Alkaline D-Peptidase; Beta-Lactamase Family Protein; Beta-Lactamase Class C
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCG IVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQL LKHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI IRAC
Sequences:
>Translated_244_residues MGMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCG IVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQL LKHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI IRAC >Mature_243_residues GMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCGI VGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQLL KHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERII RAC
Specific function: This Protein Is A Serine Beta-Lactamase With A Substrate Specificity For Cephalosporins. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 26551; Mature: 26420
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC PASLEDALTQQLHVNRQRCGIVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQLLKHTSGLPAYFEPSQMSGTD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI CCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHH IRAC HHCC >Mature Secondary Structure GMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAA CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC PASLEDALTQQLHVNRQRCGIVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQLLKHTSGLPAYFEPSQMSGTD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI CCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHH IRAC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA