Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ampC [C]

Identifier: 84623549

GI number: 84623549

Start: 2090372

End: 2091106

Strand: Direct

Name: ampC [C]

Synonym: XOO_1892

Alternate gene names: 84623549

Gene position: 2090372-2091106 (Clockwise)

Preceding gene: 84623548

Following gene: 84623551

Centisome position: 42.31

GC content: 58.23

Gene sequence:

>735_bases
ATGGGCATGTGGTCGGCAGCGATGGTATGCAGGCAAATGGATCTGCTCGATGGCAGGTCACCAGTGCAGCATCAAGTGCA
ATCTCGTCGATTGCGTCAGCCGTCCAAACGTCTGCTGTGCTGGCTTGCCGCTGCGGGGATGCTTGTCGCGCAGGTGTGCT
GTTTTCCGGCGATCGCCGCGCCTGCGTCGCTTGAGGACGCGTTGACCCAACAGCTGCATGTCAACCGTCAGCGTTGCGGC
ATTGTCGGGCAGGCGGTGTCTGTTGTGCACAACGGCAAGCCGCTATTTGGCGGCGTCGATGGGCTTGCTGGTATGGACAT
GAAGCAGCCGGTAACGCCAGAGCAGATCTTTCCTGCGTTTTCGGTGAGCAAGCTGTTTGTGAGCACGCTGATCATGCAAC
TGATCGATCCGGGTCAGCCGGCAAGACAGTATTTGCCCGGATTGCTGCAGCGCTGGGAACACATCAGCCTTGCGCAACTG
CTCAAGCATACCTCTGGCCTGCCAGCGTATTTCGAGCCGTCGCAGATGAGCGGCACGGATAAAGCCAGCGCTTCATTTCC
AGCAACTGCGCAAGCGCTGTTAGAAGTGTTGGTTGCGAGACCGTTGCTTTGTGTGCCTGGCAGCGAAACGCGCTATGTCA
ACACCAACGACGTCGTTCTTGCGCAGCTCTTGCAGGCGCATGACCGCATGCCCTGTGCACAGGTGGCATCAGAGCGAATC
ATTAGGGCCTGTTAA

Upstream 100 bases:

>100_bases
GGCCGTTCGGCGCCGGTGCCGGGAGTGCAGCGGCGGCAGCGGGGCACTGAGCCCCTGTTGAGGGGCTGCTAGACTTGCGC
CGTCAACGCAGGAGCGGGCG

Downstream 100 bases:

>100_bases
CACATTCGAAGCCCATCAACGACCAGAACGAAGCTGAGGAAGCCAAGGAACATGACATCCAGCTGCTCGAAGCGCGTGAA
AATCCGTCGGTAGCCCTTCA

Product: hypothetical protein

Products: A Substituted Beta- Amino Acid. [C]

Alternate protein names: Serine-Type D-Ala-D-Ala Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase; Alkaline D-Peptidase; Beta-Lactamase Family Protein; Beta-Lactamase Class C

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCG
IVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQL
LKHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI
IRAC

Sequences:

>Translated_244_residues
MGMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCG
IVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQL
LKHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI
IRAC
>Mature_243_residues
GMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAAPASLEDALTQQLHVNRQRCGI
VGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAFSVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQLL
KHTSGLPAYFEPSQMSGTDKASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERII
RAC

Specific function: This Protein Is A Serine Beta-Lactamase With A Substrate Specificity For Cephalosporins. [C]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.2.6 [C]

Molecular weight: Translated: 26551; Mature: 26420

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure 
GMWSAAMVCRQMDLLDGRSPVQHQVQSRRLRQPSKRLLCWLAAAGMLVAQVCCFPAIAA
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PASLEDALTQQLHVNRQRCGIVGQAVSVVHNGKPLFGGVDGLAGMDMKQPVTPEQIFPAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SVSKLFVSTLIMQLIDPGQPARQYLPGLLQRWEHISLAQLLKHTSGLPAYFEPSQMSGTD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KASASFPATAQALLEVLVARPLLCVPGSETRYVNTNDVVLAQLLQAHDRMPCAQVASERI
CCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHH
IRAC
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: A Beta-Lactam; H2O [C]

Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA