| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623455
Identifier: 84623455
GI number: 84623455
Start: 1985347
End: 1985802
Strand: Direct
Name: 84623455
Synonym: XOO_1798
Alternate gene names: NA
Gene position: 1985347-1985802 (Clockwise)
Preceding gene: 84623454
Following gene: 84623456
Centisome position: 40.19
GC content: 62.72
Gene sequence:
>456_bases ATGAGCATTCAGCGCAAAACCGAACATAGCCTCAACGACCTTATCGCCATCTCGCGCGACGGCAAGGACTTCTACGAAGA AGCCGCAGCCAAGGTGGGCGATGCAGAGCTTGCGACGCTGTTCCGTCGCATTGCCGGCGTCAAGTCCGACATCGTCAGCA GCCTGAGCAGTGTGGTCAGCGCCGCTGGCGGCACGCCGGAACAGCACGGCACCATGGTGGGCAGCATGCAGCAGTTCTAC GGAAAGGTGCGCGCCACGCTGGGCGATACCAAGTACGGTTACGTGGCCGAGCTGGAGCAGTCGGAAGACCGCCTGCTGAA GGCGTTCGACGAGACCATCGCCGACAAGGACACACCGGCTGCCGCACGCGAAGCCGCGCTGCGCCTGCTGCCGGAGGTGC GTGCTTGCCATGACGTCATGCGTAACCGCAAGTACGCAATGAAGAGCGCCGCATAA
Upstream 100 bases:
>100_bases GCGACGGCAATGCGATCAACCCATCGATCGACTCACCTCCCGCCGCAAGCGCAGTCATTGCACAGCGCAGCGTCGGTCCA TTCCAGCAAAGGAGCCGCAC
Downstream 100 bases:
>100_bases CCTGCGCGCTTGACCGAAGTGCATCGTCACCGATCCGATGCAGCTCCGGGGTAAAACGATAAAGGCGGAGACGGGCAGCG CAAGCTGCCCGTTTCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSIQRKTEHSLNDLIAISRDGKDFYEEAAAKVGDAELATLFRRIAGVKSDIVSSLSSVVSAAGGTPEQHGTMVGSMQQFY GKVRATLGDTKYGYVAELEQSEDRLLKAFDETIADKDTPAAAREAALRLLPEVRACHDVMRNRKYAMKSAA
Sequences:
>Translated_151_residues MSIQRKTEHSLNDLIAISRDGKDFYEEAAAKVGDAELATLFRRIAGVKSDIVSSLSSVVSAAGGTPEQHGTMVGSMQQFY GKVRATLGDTKYGYVAELEQSEDRLLKAFDETIADKDTPAAAREAALRLLPEVRACHDVMRNRKYAMKSAA >Mature_150_residues SIQRKTEHSLNDLIAISRDGKDFYEEAAAKVGDAELATLFRRIAGVKSDIVSSLSSVVSAAGGTPEQHGTMVGSMQQFYG KVRATLGDTKYGYVAELEQSEDRLLKAFDETIADKDTPAAAREAALRLLPEVRACHDVMRNRKYAMKSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16456; Mature: 16325
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQRKTEHSLNDLIAISRDGKDFYEEAAAKVGDAELATLFRRIAGVKSDIVSSLSSVVS CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHH AAGGTPEQHGTMVGSMQQFYGKVRATLGDTKYGYVAELEQSEDRLLKAFDETIADKDTPA HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH AAREAALRLLPEVRACHDVMRNRKYAMKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIQRKTEHSLNDLIAISRDGKDFYEEAAAKVGDAELATLFRRIAGVKSDIVSSLSSVVS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHH AAGGTPEQHGTMVGSMQQFYGKVRATLGDTKYGYVAELEQSEDRLLKAFDETIADKDTPA HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH AAREAALRLLPEVRACHDVMRNRKYAMKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA