| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is kup
Identifier: 84623203
GI number: 84623203
Start: 1701999
End: 1703906
Strand: Direct
Name: kup
Synonym: XOO_1546
Alternate gene names: 84623203
Gene position: 1701999-1703906 (Clockwise)
Preceding gene: 84623202
Following gene: 84623204
Centisome position: 34.45
GC content: 64.31
Gene sequence:
>1908_bases ATGTCCCACACTCCTACACCAGCAGCCGGCTCCGGCCACGCGTCTGCCAACAGCCAAACCGCCTTGGTCATCGGTGCCAT CGGTGTCGTCTTCGGCGATATCGGTACCAGCCCGCTGTACACCTTGAAGGAGGCGTTTTCGCCGCATTACGGGTTGACCC CGGACCACGACACCGTGCTGGGCATCCTGTCGCTGGTGTTCTGGGCGCTGATGCTGGTGGTCACGCTCAAATACGTCACC GTGATCATGCGCGCCGACAACGACGGCGAGGGCGGCATCATGGCGCTCACCGCGCTGGCGCAACGCACCCTGCCGGGCGG TTCGCGCTCGATGTACGTGGTCGGCATCCTTGGCATCTTCGGTGCGTCGCTGTTCTTTGGCGACGGCGTCATCACCCCGG CCATCTCGGTGCTGTCGGCGGTGGAAGGCCTGCAGGTGGCCGCGCCCAAACTCGAAGCGTTCGTCGTGCCGATCACCCTG GTGGTGCTGGGCATGCTGTTCCTGGCCCAGCGCTTCGGCACCGAGCGTGTAGGCAAGGCGTTCGGCCCGATCACGCTGGT CTGGTTCTTCGCGTTAGGCGCGATCGGCGTCTACAACATGGCACGCGCACCGGAAGTGCTGCATGCGTTGAACCCATGGT GGGGCGTGCTTTTCTTCGTCGAACACAACTGGCATGCGGTGTTCGTGCTCGGTGCGGTGGTGCTGGCAGTCACCGGCGGT GAGGCGCTGTACGCAGACATGGGCCATTTCGGTGCCAAGGCGATCCGTCGCTCCTGGCAATTCGTGGTACTGCCGATGCT GACCCTGACTTACCTGGGGCAGGGCGCGCTGGTGCTGCGCGATCCGTCCGCGGTCAGCAATCCGTTTTACGAAGCAGTGC CCGAGTGGGCTCTGTACCCGATGATCGTGCTGGCCACTGCGGCCACGGTGATCGCCTCGCAGGCGCTGATCACTGGCGCC TATTCGGTGGCCAGCCAGGCCATGCAGCTGGGCTACATCCCACGCATGCACATTCGCCACACATCGCACTCCACCATCGG CCAGATCTACGTGCCGGCGGTGAACTGGTGCCTGCTGTTGGCGGTGGCGGTGGCGGTGGTCGGTTTCGGCGACTCGACAT CGCTGGCGACCGCTTACGGCGTCTCGGTGACCGGCACCATGCTGATCACCACCGTGTTGATGGTCATTTACGCGCGTGCC AATCCGCGTGTGCCGGCGCCGCTGCTGTGGCTGTTCGCGCTGGTGTTTCTGGCGGTGGACTGCGCGTTCTTCTACGCCAA TATCATCAAGTTCCTGGACGGCGCCTGGTTCCCGCTGCTGCTGGGGCTGATCCTGTTTACGCTGATGCGCACCTGGCGCC GCGGCCGCAAGCTGCTGCACGATGAGATCCGCAAGGACGGCATCAAGCTCGATACCTTCCTGCCCGGGCTGATGCTGGCG CCGCCGGTGCGCGTGCCGGGTACGGCAGTATTTCTCACCGCCGACCCGATGGTGGTGCCGCACGCGCTGATGCATAACCT CAAGCACAACAAGGTGCTGCACGAGCGCAATGTGTTCCTTACGGTCGAAACGTTGCAGGGCCCGTACGCCGCCGCCGGCA AACGGCTGAAGATCGAGGCGATCGGCGACGAGTTCTACCGTGTGCATGTGCGCTTCGGTTTCATGGAGACCCCGGACGTG CCGCTGGCGCTGATGCGCTCCTGCGACCAGGGCGGCATCTACTTCGATCCGATGGACACGACCTATTTCGCCAGCCGCGA AACCATTGTGGCCAGCGCCAACCGCGGCATGCCGATCTGGCGCGACAAGCTGTTCGCGCTGATGCATCGCAACGCCGCCC CGGCGACCGGGTTCTTCCGCATTCCCGGCAATCGCCTGGTCGAATTGGGCGCACAAGTCGAGATCTGA
Upstream 100 bases:
>100_bases GCCCGTACATTGGTAGCCTGCGCGGTTTTGGTGCAGGTGCCTTCGGCAAGCGCTGTGTCCCTCATCTTCTTCACGCTGTC TGGCGAAAACTGCTCACCTC
Downstream 100 bases:
>100_bases GGCCGCCGGTGGCGGCCCGGGATTGGGGGCTGGAGATTCGGGATTGGTAAGCGCGTAGCGCTGAACGCGCCCGCGTCCGA TACTATTCGGTTCCAATTCC
Product: potassium uptake protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSHTPTPAAGSGHASANSQTALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTPDHDTVLGILSLVFWALMLVVTLKYVT VIMRADNDGEGGIMALTALAQRTLPGGSRSMYVVGILGIFGASLFFGDGVITPAISVLSAVEGLQVAAPKLEAFVVPITL VVLGMLFLAQRFGTERVGKAFGPITLVWFFALGAIGVYNMARAPEVLHALNPWWGVLFFVEHNWHAVFVLGAVVLAVTGG EALYADMGHFGAKAIRRSWQFVVLPMLTLTYLGQGALVLRDPSAVSNPFYEAVPEWALYPMIVLATAATVIASQALITGA YSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLLAVAVAVVGFGDSTSLATAYGVSVTGTMLITTVLMVIYARA NPRVPAPLLWLFALVFLAVDCAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFLPGLMLA PPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQGPYAAAGKRLKIEAIGDEFYRVHVRFGFMETPDV PLALMRSCDQGGIYFDPMDTTYFASRETIVASANRGMPIWRDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI
Sequences:
>Translated_635_residues MSHTPTPAAGSGHASANSQTALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTPDHDTVLGILSLVFWALMLVVTLKYVT VIMRADNDGEGGIMALTALAQRTLPGGSRSMYVVGILGIFGASLFFGDGVITPAISVLSAVEGLQVAAPKLEAFVVPITL VVLGMLFLAQRFGTERVGKAFGPITLVWFFALGAIGVYNMARAPEVLHALNPWWGVLFFVEHNWHAVFVLGAVVLAVTGG EALYADMGHFGAKAIRRSWQFVVLPMLTLTYLGQGALVLRDPSAVSNPFYEAVPEWALYPMIVLATAATVIASQALITGA YSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLLAVAVAVVGFGDSTSLATAYGVSVTGTMLITTVLMVIYARA NPRVPAPLLWLFALVFLAVDCAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFLPGLMLA PPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQGPYAAAGKRLKIEAIGDEFYRVHVRFGFMETPDV PLALMRSCDQGGIYFDPMDTTYFASRETIVASANRGMPIWRDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI >Mature_634_residues SHTPTPAAGSGHASANSQTALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTPDHDTVLGILSLVFWALMLVVTLKYVTV IMRADNDGEGGIMALTALAQRTLPGGSRSMYVVGILGIFGASLFFGDGVITPAISVLSAVEGLQVAAPKLEAFVVPITLV VLGMLFLAQRFGTERVGKAFGPITLVWFFALGAIGVYNMARAPEVLHALNPWWGVLFFVEHNWHAVFVLGAVVLAVTGGE ALYADMGHFGAKAIRRSWQFVVLPMLTLTYLGQGALVLRDPSAVSNPFYEAVPEWALYPMIVLATAATVIASQALITGAY SVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLLAVAVAVVGFGDSTSLATAYGVSVTGTMLITTVLMVIYARAN PRVPAPLLWLFALVFLAVDCAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFLPGLMLAP PVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQGPYAAAGKRLKIEAIGDEFYRVHVRFGFMETPDVP LALMRSCDQGGIYFDPMDTTYFASRETIVASANRGMPIWRDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=624, Percent_Identity=48.3974358974359, Blast_Score=592, Evalue=1e-170,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_XANOM (Q2P576)
Other databases:
- EMBL: AP008229 - RefSeq: YP_450575.1 - STRING: Q2P576 - GeneID: 3857465 - GenomeReviews: AP008229_GR - KEGG: xom:XOO_1546 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: SIPAFHE - PhylomeDB: Q2P576 - ProtClustDB: CLSK446388 - BioCyc: XORY342109:XOO1546-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 68871; Mature: 68740
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xeaa3dc0)-; HASH(0x11310218)-; HASH(0xe709618)-; HASH(0x11519c70)-; HASH(0x11beaf74)-; HASH(0x11a02ca8)-; HASH(0x1068bb44)-; HASH(0x113e131c)-; HASH(0xe5cca74)-; HASH(0x11a0b7f8)-; HASH(0x119d1278)-; HASH(0x11a382b0)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTPTPAAGSGHASANSQTALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTPDHDTVL CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH GILSLVFWALMLVVTLKYVTVIMRADNDGEGGIMALTALAQRTLPGGSRSMYVVGILGIF HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEHHHHH GASLFFGDGVITPAISVLSAVEGLQVAAPKLEAFVVPITLVVLGMLFLAQRFGTERVGKA HHHHHHCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FGPITLVWFFALGAIGVYNMARAPEVLHALNPWWGVLFFVEHNWHAVFVLGAVVLAVTGG HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC EALYADMGHFGAKAIRRSWQFVVLPMLTLTYLGQGALVLRDPSAVSNPFYEAVPEWALYP CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHCCCHHHHH MIVLATAATVIASQALITGAYSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHH AVAVAVVGFGDSTSLATAYGVSVTGTMLITTVLMVIYARANPRVPAPLLWLFALVFLAVD HHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFLPGLMLA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCHHCC PPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQGPYAAAGKRLKIEA CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHCCCEEEEEE IGDEFYRVHVRFGFMETPDVPLALMRSCDQGGIYFDPMDTTYFASRETIVASANRGMPIW ECCCEEEEEEEECCCCCCCCHHHHHHCCCCCCEEECCCCCCEECCCCEEEEECCCCCCHH RDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI HHHHHHHHHCCCCCCCCEEECCCHHHHHCCCCCCH >Mature Secondary Structure SHTPTPAAGSGHASANSQTALVIGAIGVVFGDIGTSPLYTLKEAFSPHYGLTPDHDTVL CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH GILSLVFWALMLVVTLKYVTVIMRADNDGEGGIMALTALAQRTLPGGSRSMYVVGILGIF HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEHHHHH GASLFFGDGVITPAISVLSAVEGLQVAAPKLEAFVVPITLVVLGMLFLAQRFGTERVGKA HHHHHHCCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FGPITLVWFFALGAIGVYNMARAPEVLHALNPWWGVLFFVEHNWHAVFVLGAVVLAVTGG HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC EALYADMGHFGAKAIRRSWQFVVLPMLTLTYLGQGALVLRDPSAVSNPFYEAVPEWALYP CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHCCCHHHHH MIVLATAATVIASQALITGAYSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHH AVAVAVVGFGDSTSLATAYGVSVTGTMLITTVLMVIYARANPRVPAPLLWLFALVFLAVD HHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFLPGLMLA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCHHCC PPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQGPYAAAGKRLKIEA CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHCCCEEEEEE IGDEFYRVHVRFGFMETPDVPLALMRSCDQGGIYFDPMDTTYFASRETIVASANRGMPIW ECCCEEEEEEEECCCCCCCCHHHHHHCCCCCCEEECCCCCCEECCCCEEEEECCCCCCHH RDKLFALMHRNAAPATGFFRIPGNRLVELGAQVEI HHHHHHHHHCCCCCCCCEEECCCHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA