| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623135
Identifier: 84623135
GI number: 84623135
Start: 1619087
End: 1619383
Strand: Direct
Name: 84623135
Synonym: XOO_1478
Alternate gene names: NA
Gene position: 1619087-1619383 (Clockwise)
Preceding gene: 84623134
Following gene: 84623136
Centisome position: 32.77
GC content: 52.19
Gene sequence:
>297_bases ATGAAGGTACGCATCAAGGATCTGAGCGTCACGATGGAGCTCGGCAACAATGGGGTCATCTTTGACGTCTACGGCAACGA TGAAACATTCTTGGGCGACTTGCGTCTGGGCCGGGGCAAGGTCGAATGGTGTAAGGGCAAAACCAAGTCAGGCAATGGCA TTCAAGTGAACTGGACAGAACTGCTCGCATTTTTCGAAGAGGTAGCAGCGAAGAAGGTTGCGAAAAAAGCGGCGAAGAAA GGTACCAAGAAGGTTGATAAGGGCGCCGCATCCAAGGCGAAGACAGAAGGGCCTTGA
Upstream 100 bases:
>100_bases CGCAACGCGGTCACCCCAGCCTAGCGGGGCTTGAATCGGATTTCTTAGGGGCGACGTGTTAGGTTTAGGTTACCTCTACA ACAGTCTCAGGGGGAATGGC
Downstream 100 bases:
>100_bases GGCGTATGATGGTCAATCGCAGGCGCTAGTATCCGCGATTGACGCTTGAATGCTCTCAGTGTTTTCGTATTCGTTGGATA ACGCCTGCCATTGTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKVRIKDLSVTMELGNNGVIFDVYGNDETFLGDLRLGRGKVEWCKGKTKSGNGIQVNWTELLAFFEEVAAKKVAKKAAKK GTKKVDKGAASKAKTEGP
Sequences:
>Translated_98_residues MKVRIKDLSVTMELGNNGVIFDVYGNDETFLGDLRLGRGKVEWCKGKTKSGNGIQVNWTELLAFFEEVAAKKVAKKAAKK GTKKVDKGAASKAKTEGP >Mature_98_residues MKVRIKDLSVTMELGNNGVIFDVYGNDETFLGDLRLGRGKVEWCKGKTKSGNGIQVNWTELLAFFEEVAAKKVAKKAAKK GTKKVDKGAASKAKTEGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10646; Mature: 10646
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRIKDLSVTMELGNNGVIFDVYGNDETFLGDLRLGRGKVEWCKGKTKSGNGIQVNWTE CEEEEEEEEEEEEECCCEEEEEEECCCCEEEECEECCCCCEEECCCCCCCCCCEEEEHHH LLAFFEEVAAKKVAKKAAKKGTKKVDKGAASKAKTEGP HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MKVRIKDLSVTMELGNNGVIFDVYGNDETFLGDLRLGRGKVEWCKGKTKSGNGIQVNWTE CEEEEEEEEEEEEECCCEEEEEEECCCCEEEECEECCCCCEEECCCCCCCCCCEEEEHHH LLAFFEEVAAKKVAKKAAKKGTKKVDKGAASKAKTEGP HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA