| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is cptA [H]
Identifier: 84623126
GI number: 84623126
Start: 1606777
End: 1608366
Strand: Direct
Name: cptA [H]
Synonym: XOO_1469
Alternate gene names: 84623126
Gene position: 1606777-1608366 (Clockwise)
Preceding gene: 84623125
Following gene: 84623127
Centisome position: 32.52
GC content: 61.64
Gene sequence:
>1590_bases ATGTTGATCGTGAACGGGGGCGATGACGTCGGGATATCTGCGCTGTATGCGTTGGCGGGCCTGGTTGTTTCGGTCTCGCC CCTGCGGAGGCTGCCGCGCCTGACCTGCACTTGGTTGGCGCTCATCAGTGCCGGCGCGATTGTGCAGGTGGAGATGCTGC TGCGCTTCGGGGGAATGGTGGACGTCAACGCGCTCGCGCTGGTCTCCGAGACCACCAGTGGCGAAGCTTTGCCGTTGCTG CACTCAGTGCCTGTACGCCTTCTGTTTGGCTGGGGACTGATTGTTGTGATCTGGGGAGGGCTGATGCTATGGCCGCCGCG ACTTTTGCGATGGCCGGGCAGGCGGCTTGCATTATTCGGCGGTGGCGTATGTGCGGCGCTGCTGGCAATCGTCGTTGCGT TCGAAGGCTTGCACGAGACGCCGGTGGGTGCTGCTTTCGATCAGCCATCCTTGGAACGCATGGAGGCCCTGCGGCGGGGG TACCCGACGGGAATGCCGTTGGTCATCTGGGAATATTTCCGGCAGCGTCGAGAACTGGTCGCTGCTGATGCCGGCCTTGA AAGCTTTCGATTCGGAGCCAGCCGCTTGGTGGTGGGGGGCTGGCCACGGCGTGTGCATGTGCTGGTGATCGGCGAGACAG GTCGAGCCGATCATTGGGCGCTGAACGGCTACAGCCGTGACAGTACGCCTCGGCTTTCGAGTCGCAATGACCTGATCAGC TTTACGAAGTTCTACTCGCGAGCCACCTTCACCCGGCTGTCGGTGCCCGTGATTCTGAGCCGCAAGCCGCCGGGTTCGGT CGAAGCTACCTTCGGTGAGCGCTCGTTGTTGCAGGCTGCCCGCGAAGCCGGCTATCACACGGTGTGGCTCTCCAATCAGG CGCCGATGGGGTTCCATGATTCGCCTATTACGGTTCTGGCCAAGGATGCCGATGACGTGCGCTTTGTCAGCCCGGTCGAC TATCGCCACGCAGGCGTCCGCGACGAGGATCTGCTGCCGCACGTCAGGCGTCTCCTTGCCGCCGACCAGCGCGATCTGTT CCTAGTGATCCATACGATGGGCAGTCACTTCCGCTATCGGGACCGGTACCGCCCCGAGGATGCGGTCTTCCTGCCGGACA AGCCGGAACATGGCGATGCCAGGTTGTATGACCCAAATCACAAAGAGTACCTGGTCAATGGATACGACAACTCGATCCGC GCTACCGATCGCTTCCTTGATGGCCTGATCGCTCAGCTCGGGAAACTTGATGCTGCATCGTGGATGTTCTATGTCGCCGA TCACGGCGAGGCGCTGTTCGATGACTGTCGCGCCGAAAGCGGGCACGGCCAATCATCACCAGCGACCCATCACGTCGCGG CGGTATGGTGGGGATCTGAGGCGTACATCAAGCACGCGCCGGAGGCCGTTCGGAATCTCCGCGCGAACGCCGACGCGATG TTATCTACCTCCATGGTCTTCGACACCACAACCCGATTGGCGGGTATCGACGTGCCCGGCTACCGCCAATCGTACGATTT TTCCTCGGCAGAGCCTGGTATTCCTCTCGATATTGCGTCGCTGCCGCTCGATGTTCCCCGCTGTCACTGA
Upstream 100 bases:
>100_bases ACGCGGGGCTTTTTTTTTCTGGAGGCATATCGTGTTGCGGGGCAAACGGGCACTAGTAGGGGCGGCTTTTTTCGTGTCGG TCAGTTTGACCCCCGTTGTC
Downstream 100 bases:
>100_bases ACAGGAGTCCGTGTTGAACGGTTCATCAACGAATGCGTCAGGAAAAGCGGGGTGGATTTCATCCTTGGGCGTGTTGTTTT TCCTCTCTGGTGCTGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MLIVNGGDDVGISALYALAGLVVSVSPLRRLPRLTCTWLALISAGAIVQVEMLLRFGGMVDVNALALVSETTSGEALPLL HSVPVRLLFGWGLIVVIWGGLMLWPPRLLRWPGRRLALFGGGVCAALLAIVVAFEGLHETPVGAAFDQPSLERMEALRRG YPTGMPLVIWEYFRQRRELVAADAGLESFRFGASRLVVGGWPRRVHVLVIGETGRADHWALNGYSRDSTPRLSSRNDLIS FTKFYSRATFTRLSVPVILSRKPPGSVEATFGERSLLQAAREAGYHTVWLSNQAPMGFHDSPITVLAKDADDVRFVSPVD YRHAGVRDEDLLPHVRRLLAADQRDLFLVIHTMGSHFRYRDRYRPEDAVFLPDKPEHGDARLYDPNHKEYLVNGYDNSIR ATDRFLDGLIAQLGKLDAASWMFYVADHGEALFDDCRAESGHGQSSPATHHVAAVWWGSEAYIKHAPEAVRNLRANADAM LSTSMVFDTTTRLAGIDVPGYRQSYDFSSAEPGIPLDIASLPLDVPRCH
Sequences:
>Translated_529_residues MLIVNGGDDVGISALYALAGLVVSVSPLRRLPRLTCTWLALISAGAIVQVEMLLRFGGMVDVNALALVSETTSGEALPLL HSVPVRLLFGWGLIVVIWGGLMLWPPRLLRWPGRRLALFGGGVCAALLAIVVAFEGLHETPVGAAFDQPSLERMEALRRG YPTGMPLVIWEYFRQRRELVAADAGLESFRFGASRLVVGGWPRRVHVLVIGETGRADHWALNGYSRDSTPRLSSRNDLIS FTKFYSRATFTRLSVPVILSRKPPGSVEATFGERSLLQAAREAGYHTVWLSNQAPMGFHDSPITVLAKDADDVRFVSPVD YRHAGVRDEDLLPHVRRLLAADQRDLFLVIHTMGSHFRYRDRYRPEDAVFLPDKPEHGDARLYDPNHKEYLVNGYDNSIR ATDRFLDGLIAQLGKLDAASWMFYVADHGEALFDDCRAESGHGQSSPATHHVAAVWWGSEAYIKHAPEAVRNLRANADAM LSTSMVFDTTTRLAGIDVPGYRQSYDFSSAEPGIPLDIASLPLDVPRCH >Mature_529_residues MLIVNGGDDVGISALYALAGLVVSVSPLRRLPRLTCTWLALISAGAIVQVEMLLRFGGMVDVNALALVSETTSGEALPLL HSVPVRLLFGWGLIVVIWGGLMLWPPRLLRWPGRRLALFGGGVCAALLAIVVAFEGLHETPVGAAFDQPSLERMEALRRG YPTGMPLVIWEYFRQRRELVAADAGLESFRFGASRLVVGGWPRRVHVLVIGETGRADHWALNGYSRDSTPRLSSRNDLIS FTKFYSRATFTRLSVPVILSRKPPGSVEATFGERSLLQAAREAGYHTVWLSNQAPMGFHDSPITVLAKDADDVRFVSPVD YRHAGVRDEDLLPHVRRLLAADQRDLFLVIHTMGSHFRYRDRYRPEDAVFLPDKPEHGDARLYDPNHKEYLVNGYDNSIR ATDRFLDGLIAQLGKLDAASWMFYVADHGEALFDDCRAESGHGQSSPATHHVAAVWWGSEAYIKHAPEAVRNLRANADAM LSTSMVFDTTTRLAGIDVPGYRQSYDFSSAEPGIPLDIASLPLDVPRCH
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the outer membrane lipopolysaccharide core [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. CptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790392, Length=310, Percent_Identity=24.8387096774194, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI87082372, Length=505, Percent_Identity=23.5643564356436, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87082286, Length=308, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87082223, Length=258, Percent_Identity=30.6201550387597, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787035, Length=231, Percent_Identity=29.004329004329, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 58498; Mature: 58498
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVNGGDDVGISALYALAGLVVSVSPLRRLPRLTCTWLALISAGAIVQVEMLLRFGGMV CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCE DVNALALVSETTSGEALPLLHSVPVRLLFGWGLIVVIWGGLMLWPPRLLRWPGRRLALFG ECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCEEEEEC GGVCAALLAIVVAFEGLHETPVGAAFDQPSLERMEALRRGYPTGMPLVIWEYFRQRRELV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AADAGLESFRFGASRLVVGGWPRRVHVLVIGETGRADHWALNGYSRDSTPRLSSRNDLIS HHHCCHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHH FTKFYSRATFTRLSVPVILSRKPPGSVEATFGERSLLQAAREAGYHTVWLSNQAPMGFHD HHHHHHHHHHEEECCEEEEECCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCC SPITVLAKDADDVRFVSPVDYRHAGVRDEDLLPHVRRLLAADQRDLFLVIHTMGSHFRYR CCCEEEECCCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEC DRYRPEDAVFLPDKPEHGDARLYDPNHKEYLVNGYDNSIRATDRFLDGLIAQLGKLDAAS CCCCCCCCEECCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC WMFYVADHGEALFDDCRAESGHGQSSPATHHVAAVWWGSEAYIKHAPEAVRNLRANADAM EEEEEECCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHCHHHHHHHHCCCCHH LSTSMVFDTTTRLAGIDVPGYRQSYDFSSAEPGIPLDIASLPLDVPRCH HHHHHEEECHHHEEECCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCC >Mature Secondary Structure MLIVNGGDDVGISALYALAGLVVSVSPLRRLPRLTCTWLALISAGAIVQVEMLLRFGGMV CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCE DVNALALVSETTSGEALPLLHSVPVRLLFGWGLIVVIWGGLMLWPPRLLRWPGRRLALFG ECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCEEEEEC GGVCAALLAIVVAFEGLHETPVGAAFDQPSLERMEALRRGYPTGMPLVIWEYFRQRRELV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AADAGLESFRFGASRLVVGGWPRRVHVLVIGETGRADHWALNGYSRDSTPRLSSRNDLIS HHHCCHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHH FTKFYSRATFTRLSVPVILSRKPPGSVEATFGERSLLQAAREAGYHTVWLSNQAPMGFHD HHHHHHHHHHEEECCEEEEECCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCC SPITVLAKDADDVRFVSPVDYRHAGVRDEDLLPHVRRLLAADQRDLFLVIHTMGSHFRYR CCCEEEECCCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEC DRYRPEDAVFLPDKPEHGDARLYDPNHKEYLVNGYDNSIRATDRFLDGLIAQLGKLDAAS CCCCCCCCEECCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC WMFYVADHGEALFDDCRAESGHGQSSPATHHVAAVWWGSEAYIKHAPEAVRNLRANADAM EEEEEECCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHCHHHHHHHHCCCCHH LSTSMVFDTTTRLAGIDVPGYRQSYDFSSAEPGIPLDIASLPLDVPRCH HHHHHEEECHHHEEECCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]