| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is napA [H]
Identifier: 84623102
GI number: 84623102
Start: 1573491
End: 1574756
Strand: Direct
Name: napA [H]
Synonym: XOO_1445
Alternate gene names: 84623102
Gene position: 1573491-1574756 (Clockwise)
Preceding gene: 84623101
Following gene: 84623105
Centisome position: 31.85
GC content: 63.27
Gene sequence:
>1266_bases ATGACCACTGCGCAGATGTCGGTGTATTTCTTTTTGCAGGCTGCCGCGATCTTGCTGGTGTGTCGGCTGGTCGGCATGCT GGCCAAGCGCCTCGGACAGCCGCAGGTGGTGGGCGAAATGATTGCCGGCGTGATGCTGGGGCCCTCGCTGTTCGGCTTGC TGGCACCTGGCGCGCAGGCGGCCTTGTTCCCCAAGCAGACCATGGACGTGCTGTACGTGTTCGCGCAGTTCGGCGTGGGC ATGTACATGTTTCTGGTCGGTACCGATTTTCGCAGCGATCACTTTCGCGCGCGCTATCGCAGCGCGATGAGCGTGTCGCT GGCGGGCATCGCGGTGCCGTTCCTGCTGGCGTTTGCCATGTGCCCATGGTTGATCAACGTGGAAGGCCTGTTCTCGGAAA AGGCCAAGCTGATGGAAGCGTCGCTGTTCCTGGGCGCGGCGATCGCGATCACCGCCTTCCCGATGCTGGCACGCATCATC CACGAGCGCGGTCTGGCCACTAGCCCTTTGGGGACCTTGGCGTTGACCGCTGGTGCGTTCGACGATGCGTCTGCGTGGTG CATTTTGGCCGTGGTGCTGGCCAGCTTCGGCGGCAGTTGGGGCAGTGCCTACCTGGCCATCGGCGGCGGCATTGGGTATG CGGTTTTCATGATTTTCGTCGGCCGGCATCTGCTCAAGCGGCTGGCCGATCATGTGGTGCCCGGCCAGCCGCTGAGCAAT AGTGTGTTGGCAGTGGTGCTGATCCTGTTCTGCGTCAGCGCCTGGGCGATGGACGCGATCGGTATCCACGCGGTCTTCGG TGGTTTCCTGCTCGGCGTCTGCCTGCCCAGAGGCGCATTGACCGAGAAGCTGCGCGAGATGCTGCAGCCGTTCGTCGTGG TCTTGCTGCTGCCGATGTTCTTCACCTATTCGGGCTTGAAAACCCAGCTCAGCGTGTTGCTGCAGCCGCAGATCATGCTG GCCGGCGTGGCGATCCTGGCCGCCTCGTTCATCGGCAAGGGCGTGGCCTGCTGGGCAGCGGCGCGTACGACCGGCGAGAA CAACCGCGACGCGATGGCGATCGGCGCGCTGATGAATGCACGCGGGCTGATGGAGCTGATCATCATCAACATCGGCTTGC AGGCGGGTGTGATCGAACAAGGCCTGTTCTCGGTGCTGGTGCTGATGGCGATCCTGTCCACGTTGATGGCCACGCCGTTG TTCAACTGGATCATGCGTCGCCACGCCCACGTGAGCGACGCGGTGCCGAGCCTGCAATCGCGGTGA
Upstream 100 bases:
>100_bases GCGCGCGCTTGGGCCCGGATAGCCACCGGCAACTGCATGCTATCGAAGCGCGGCATGTCCGGTTACGATCTGCGCACTTT TCAGGGATGTTGCCGCACGC
Downstream 100 bases:
>100_bases TAGCGCGCAGTTGTCTGCTGTGGCCGGCAACTGCAGCGGCGTGCGCGTTTGGGGGGCGTCAACGCCCCAGCGGTAACCGC ACGCCGGCCAGCAGGCCACC
Product: cation:proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTTAQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGAQAALFPKQTMDVLYVFAQFGVG MYMFLVGTDFRSDHFRARYRSAMSVSLAGIAVPFLLAFAMCPWLINVEGLFSEKAKLMEASLFLGAAIAITAFPMLARII HERGLATSPLGTLALTAGAFDDASAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN SVLAVVLILFCVSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIML AGVAILAASFIGKGVACWAAARTTGENNRDAMAIGALMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPL FNWIMRRHAHVSDAVPSLQSR
Sequences:
>Translated_421_residues MTTAQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGAQAALFPKQTMDVLYVFAQFGVG MYMFLVGTDFRSDHFRARYRSAMSVSLAGIAVPFLLAFAMCPWLINVEGLFSEKAKLMEASLFLGAAIAITAFPMLARII HERGLATSPLGTLALTAGAFDDASAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN SVLAVVLILFCVSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIML AGVAILAASFIGKGVACWAAARTTGENNRDAMAIGALMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPL FNWIMRRHAHVSDAVPSLQSR >Mature_420_residues TTAQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGAQAALFPKQTMDVLYVFAQFGVGM YMFLVGTDFRSDHFRARYRSAMSVSLAGIAVPFLLAFAMCPWLINVEGLFSEKAKLMEASLFLGAAIAITAFPMLARIIH ERGLATSPLGTLALTAGAFDDASAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSNS VLAVVLILFCVSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIMLA GVAILAASFIGKGVACWAAARTTGENNRDAMAIGALMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLF NWIMRRHAHVSDAVPSLQSR
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=404, Percent_Identity=31.6831683168317, Blast_Score=182, Evalue=9e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 44896; Mature: 44764
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGAQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ALFPKQTMDVLYVFAQFGVGMYMFLVGTDFRSDHFRARYRSAMSVSLAGIAVPFLLAFAM HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CPWLINVEGLFSEKAKLMEASLFLGAAIAITAFPMLARIIHERGLATSPLGTLALTAGAF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC DDASAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN CCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SVLAVVLILFCVSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FTYSGLKTQLSVLLQPQIMLAGVAILAASFIGKGVACWAAARTTGENNRDAMAIGALMNA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH RGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLFNWIMRRHAHVSDAVPSLQS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C >Mature Secondary Structure TTAQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGAQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ALFPKQTMDVLYVFAQFGVGMYMFLVGTDFRSDHFRARYRSAMSVSLAGIAVPFLLAFAM HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CPWLINVEGLFSEKAKLMEASLFLGAAIAITAFPMLARIIHERGLATSPLGTLALTAGAF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC DDASAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN CCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SVLAVVLILFCVSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FTYSGLKTQLSVLLQPQIMLAGVAILAASFIGKGVACWAAARTTGENNRDAMAIGALMNA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH RGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLFNWIMRRHAHVSDAVPSLQS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]