| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623006
Identifier: 84623006
GI number: 84623006
Start: 1470418
End: 1472526
Strand: Direct
Name: 84623006
Synonym: XOO_1349
Alternate gene names: NA
Gene position: 1470418-1472526 (Clockwise)
Preceding gene: 84623005
Following gene: 84623007
Centisome position: 29.76
GC content: 62.68
Gene sequence:
>2109_bases ATGGCATTTAGACAGGGGTGGTACCAGACCCGCCGCGAGACCGGCGGCCCCAACGAAGGCCGGGTGCATTGCCGTTATTT CGTGGATGCGTCGACCTACAGTGCGCAGTGCATCGTAGAGGCCAACGGCGCGCAAATTCTGACATGGCAGGCGCAGGATC CCTCGCACTACCGCAAGGCGGCCTGGTCGAGCGAGTATGTCAAGTTGGCCAGTGCCAAGCCCGGCGACTGGTGGGACAAC CCGGCCACATCCGCGGGGTATAACCCCGACATCCCCGGCGATTACTCGCGTGAAAAGCGCAAGCCAACCGCCCGCGAATT GTGCCAGCGTGCCAGCCATGTCGATCCGGCCGCCACCGATGGGCTGCAGTGCAGCAAGGAGATCCATGTCGGCATCTTCT TCGACGGCACCAATAACAATATGGAGCGCGATCGCCCGCTGCTCGGGCATTCCAATATCGTCAGCCTGTTTGATGCGCAC AAGGACGACCGGAAGACCTGTTTCCGCTACTACATCCCCGGAGTCGGCACGCCCTTCAGGCAGATCGGCGAAACGACCGA GTCCGATGACGGGAAGGCCTTTGCCACCGGTGGCGAATCGCGCATCTACTGGGCCATGCTGCTGGTCTATAACGCTGTAT GTGCGGCAGTAACCGGTAATGATCTACTGCAAGAAGCGGAAATGACTCGCCTGGTCACCAGCTACGGCGGCGGTTTGAAG ACGGCCTGGCACCTGGGCAACGACAAGGCGCGCACGGTCTTGCGCGGCGTGCATCAGCGCCTGCTCACGGCGGTGGAAGG CCGGCGCCCCACCGTGCTGCGCCTGAACCTGTCGGTGTTCGGCTTTTCCCGTGGCGCGGCGCAGGCACGCACCTTCTGCA ACTGGCTGCAGGAGGCCACCGGGGGCATGGTGGGCACGGCCGCGCTCAGGCTGCGCTTTGTTGGCCTCTTCGACACCGTC GCCTCGGTCGGCCTGGCCGATTCGTCACCGGTGGGGACCGGCTTCATGGACTGGGCCGACGGCACGATGGAGATCCAGGG GGTCGAACGTGGCCTGCACTATGTGGCAGCGCATGAAATCCGCCGCTCGTTCCCGCTGTCCACCGCGCGCGGCCAGGGGG GCATCGCAGTGTCGGGGCTGAGCGAGTACATCTATCCGGGCGCGCATTCGGATCTGGGCGGTGGCTACTCACCGGGCGAT CAGGGCAAGGCCGCCGGAGCGCGCGCCAAACTGCTGTCGCAGATACCGCTTAACGATATGCACTTCGAAGCAATAAATGC TGGAACTGAGCTCAAACGCAAAGATCAGCTTCCCTTGGAAATCAAGTCAGACTTCGTCGTGGACGAGGGCCTTGATTCCG CGTTTGCCGCTTACACCCAATGGACCACCCAACTCGACGAAAAGGCCGATGACGTGGCCTCGCGCGCCAAGGCCGAGGTG GATGGGCGCATGCAGTACCACATGCAGTTGTACTGGCGTTGGCGCGCAAGCAAGCAAACCGACGCGCAGTTCAAGCAGAT GGTCAGCTACCGCACGGCCAGCGCTCAGGACAAACAGGATCTGTGGGAGGCCGAGGGAGACTGGCGCAGGGACATGGAAC AGGCGCGGCGTGCGGTCGAAACGCCGGCACCGCGTTCAACCGTCGGCGCTGTCAGCCGTGCCCTGTATCAGGCGGTCAAG CAACAGGTACAGGTTCCCCCGCTCGTGGATGCCTTTTTCGACCAGCATGTGCACGACTCGCACGCCGGCTTCTGGTTGCT GGGGCCGCAGACCACCTACGACCGTCAGGTCTATATCAACGAAGTCAAGGCCAAGCAGAAAACCTACGAAGAGCTGACGG AACTCGCGCGGACGACCACGAGTCCGGAGGCGAGTGTCGCGCTCCACGCGCAGGCATTGACCTACCAACTGAACAACTTC GAACGGCGCGTGCTTGATGTAGCGGCCGCCGGATCAGCGCAGTTCCCATTGATGACCGATGCCGACGCTGCCGACATGGC TAGCCATAAAGGCATCAAGACACAAGCAGCCTTATGGGCGATGGGGACGGGCACACGGCGTGAGGCGAACGGGCATGGTC AATATCGCCGGCTATTCGACCGTAGTTGA
Upstream 100 bases:
>100_bases CAATCCGAACCCGGCGCGCCGCTGGCACCCCCGAAGTCGCCACGGCGCTGACCCTCGAACAGTCGCCACAACCGCATCGC AGCATCGCAAGGAGACAGAC
Downstream 100 bases:
>100_bases TGTAACGCGGCAGATGTTCGCTTGCGATCATTTACCGACACACGCACCGCCAGGCGCACGTTGGCCCGCTCCATCGGGCT GCTGACCCAGTCACCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MAFRQGWYQTRRETGGPNEGRVHCRYFVDASTYSAQCIVEANGAQILTWQAQDPSHYRKAAWSSEYVKLASAKPGDWWDN PATSAGYNPDIPGDYSREKRKPTARELCQRASHVDPAATDGLQCSKEIHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAH KDDRKTCFRYYIPGVGTPFRQIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVTGNDLLQEAEMTRLVTSYGGGLK TAWHLGNDKARTVLRGVHQRLLTAVEGRRPTVLRLNLSVFGFSRGAAQARTFCNWLQEATGGMVGTAALRLRFVGLFDTV ASVGLADSSPVGTGFMDWADGTMEIQGVERGLHYVAAHEIRRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGD QGKAAGARAKLLSQIPLNDMHFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQWTTQLDEKADDVASRAKAEV DGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDLWEAEGDWRRDMEQARRAVETPAPRSTVGAVSRALYQAVK QQVQVPPLVDAFFDQHVHDSHAGFWLLGPQTTYDRQVYINEVKAKQKTYEELTELARTTTSPEASVALHAQALTYQLNNF ERRVLDVAAAGSAQFPLMTDADAADMASHKGIKTQAALWAMGTGTRREANGHGQYRRLFDRS
Sequences:
>Translated_702_residues MAFRQGWYQTRRETGGPNEGRVHCRYFVDASTYSAQCIVEANGAQILTWQAQDPSHYRKAAWSSEYVKLASAKPGDWWDN PATSAGYNPDIPGDYSREKRKPTARELCQRASHVDPAATDGLQCSKEIHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAH KDDRKTCFRYYIPGVGTPFRQIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVTGNDLLQEAEMTRLVTSYGGGLK TAWHLGNDKARTVLRGVHQRLLTAVEGRRPTVLRLNLSVFGFSRGAAQARTFCNWLQEATGGMVGTAALRLRFVGLFDTV ASVGLADSSPVGTGFMDWADGTMEIQGVERGLHYVAAHEIRRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGD QGKAAGARAKLLSQIPLNDMHFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQWTTQLDEKADDVASRAKAEV DGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDLWEAEGDWRRDMEQARRAVETPAPRSTVGAVSRALYQAVK QQVQVPPLVDAFFDQHVHDSHAGFWLLGPQTTYDRQVYINEVKAKQKTYEELTELARTTTSPEASVALHAQALTYQLNNF ERRVLDVAAAGSAQFPLMTDADAADMASHKGIKTQAALWAMGTGTRREANGHGQYRRLFDRS >Mature_701_residues AFRQGWYQTRRETGGPNEGRVHCRYFVDASTYSAQCIVEANGAQILTWQAQDPSHYRKAAWSSEYVKLASAKPGDWWDNP ATSAGYNPDIPGDYSREKRKPTARELCQRASHVDPAATDGLQCSKEIHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAHK DDRKTCFRYYIPGVGTPFRQIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVTGNDLLQEAEMTRLVTSYGGGLKT AWHLGNDKARTVLRGVHQRLLTAVEGRRPTVLRLNLSVFGFSRGAAQARTFCNWLQEATGGMVGTAALRLRFVGLFDTVA SVGLADSSPVGTGFMDWADGTMEIQGVERGLHYVAAHEIRRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGDQ GKAAGARAKLLSQIPLNDMHFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQWTTQLDEKADDVASRAKAEVD GRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDLWEAEGDWRRDMEQARRAVETPAPRSTVGAVSRALYQAVKQ QVQVPPLVDAFFDQHVHDSHAGFWLLGPQTTYDRQVYINEVKAKQKTYEELTELARTTTSPEASVALHAQALTYQLNNFE RRVLDVAAAGSAQFPLMTDADAADMASHKGIKTQAALWAMGTGTRREANGHGQYRRLFDRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77774; Mature: 77642
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRQGWYQTRRETGGPNEGRVHCRYFVDASTYSAQCIVEANGAQILTWQAQDPSHYRKA CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHH AWSSEYVKLASAKPGDWWDNPATSAGYNPDIPGDYSREKRKPTARELCQRASHVDPAATD HCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCC GLQCSKEIHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAHKDDRKTCFRYYIPGVGTPFR CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHEECCCCCCCHH QIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVTGNDLLQEAEMTRLVTSYGGGLK HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TAWHLGNDKARTVLRGVHQRLLTAVEGRRPTVLRLNLSVFGFSRGAAQARTFCNWLQEAT EEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHH GGMVGTAALRLRFVGLFDTVASVGLADSSPVGTGFMDWADGTMEIQGVERGLHYVAAHEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH RRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGDQGKAAGARAKLLSQIPLNDM HHHCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC HFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQWTTQLDEKADDVASRAKAEV CHHHHCCCCHHHHCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDLWEAEGDWRRDMEQARRAVE CCHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHC TPAPRSTVGAVSRALYQAVKQQVQVPPLVDAFFDQHVHDSHAGFWLLGPQTTYDRQVYIN CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH EVKAKQKTYEELTELARTTTSPEASVALHAQALTYQLNNFERRVLDVAAAGSAQFPLMTD HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC ADAADMASHKGIKTQAALWAMGTGTRREANGHGQYRRLFDRS CCHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure AFRQGWYQTRRETGGPNEGRVHCRYFVDASTYSAQCIVEANGAQILTWQAQDPSHYRKA CCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHH AWSSEYVKLASAKPGDWWDNPATSAGYNPDIPGDYSREKRKPTARELCQRASHVDPAATD HCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCC GLQCSKEIHVGIFFDGTNNNMERDRPLLGHSNIVSLFDAHKDDRKTCFRYYIPGVGTPFR CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHEECCCCCCCHH QIGETTESDDGKAFATGGESRIYWAMLLVYNAVCAAVTGNDLLQEAEMTRLVTSYGGGLK HHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TAWHLGNDKARTVLRGVHQRLLTAVEGRRPTVLRLNLSVFGFSRGAAQARTFCNWLQEAT EEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHH GGMVGTAALRLRFVGLFDTVASVGLADSSPVGTGFMDWADGTMEIQGVERGLHYVAAHEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH RRSFPLSTARGQGGIAVSGLSEYIYPGAHSDLGGGYSPGDQGKAAGARAKLLSQIPLNDM HHHCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC HFEAINAGTELKRKDQLPLEIKSDFVVDEGLDSAFAAYTQWTTQLDEKADDVASRAKAEV CHHHHCCCCHHHHCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGRMQYHMQLYWRWRASKQTDAQFKQMVSYRTASAQDKQDLWEAEGDWRRDMEQARRAVE CCHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHC TPAPRSTVGAVSRALYQAVKQQVQVPPLVDAFFDQHVHDSHAGFWLLGPQTTYDRQVYIN CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH EVKAKQKTYEELTELARTTTSPEASVALHAQALTYQLNNFERRVLDVAAAGSAQFPLMTD HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEECC ADAADMASHKGIKTQAALWAMGTGTRREANGHGQYRRLFDRS CCHHHHHHCCCCCHHHHEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA