| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623001
Identifier: 84623001
GI number: 84623001
Start: 1467051
End: 1467401
Strand: Direct
Name: 84623001
Synonym: XOO_1344
Alternate gene names: NA
Gene position: 1467051-1467401 (Clockwise)
Preceding gene: 84623000
Following gene: 84623002
Centisome position: 29.7
GC content: 58.97
Gene sequence:
>351_bases ATGCCTGATAGTCACAAGCACCGGCTCCGTTTGCCTGCAGACATCAGGCGCGGCCTGGTGCACCGCACGGTGCTTGGGTT GTCCCGTTTGCTGATGCTGGCAGCATTGCTGCCGCTGGGCGCATGCTCCAAGCCAACAGGTGAGCAGGTAGACGGTGGGA TGGCAACCGCCAATATCAGCCCCTACAACCATACCGGCGACTATATCCATCAGCTATATATTGATGGACAGTGGGGCGGG AATTCACGCGCTTATGGGGGGGGGCGGAACTTTCGTATGCTGCATCGCCTACCCACGCACGTGGAGGGCTGGTCTAACTG CAAAAGTTCGCTGGACCACGTCCAGCTCTGA
Upstream 100 bases:
>100_bases TGGACATCCATTGCACAGCACAAGATCGGTCTTTGCGATTCGATGCGCTCGTGGGGCGATGTCATCTGGAAGGCCCTTGA AACCCGCAGAGATAAAATCG
Downstream 100 bases:
>100_bases TCCGCAAGGCTCACCTGAAGAAACATGGCACGAAAAAATCGTACCAATCGAGCGCTATGAGAAAAGCGGCACCACCTTGA ACGTACACTTCCTGCCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPDSHKHRLRLPADIRRGLVHRTVLGLSRLLMLAALLPLGACSKPTGEQVDGGMATANISPYNHTGDYIHQLYIDGQWGG NSRAYGGGRNFRMLHRLPTHVEGWSNCKSSLDHVQL
Sequences:
>Translated_116_residues MPDSHKHRLRLPADIRRGLVHRTVLGLSRLLMLAALLPLGACSKPTGEQVDGGMATANISPYNHTGDYIHQLYIDGQWGG NSRAYGGGRNFRMLHRLPTHVEGWSNCKSSLDHVQL >Mature_115_residues PDSHKHRLRLPADIRRGLVHRTVLGLSRLLMLAALLPLGACSKPTGEQVDGGMATANISPYNHTGDYIHQLYIDGQWGGN SRAYGGGRNFRMLHRLPTHVEGWSNCKSSLDHVQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12837; Mature: 12706
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSHKHRLRLPADIRRGLVHRTVLGLSRLLMLAALLPLGACSKPTGEQVDGGMATANIS CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC PYNHTGDYIHQLYIDGQWGGNSRAYGGGRNFRMLHRLPTHVEGWSNCKSSLDHVQL CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PDSHKHRLRLPADIRRGLVHRTVLGLSRLLMLAALLPLGACSKPTGEQVDGGMATANIS CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC PYNHTGDYIHQLYIDGQWGGNSRAYGGGRNFRMLHRLPTHVEGWSNCKSSLDHVQL CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA