| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623000
Identifier: 84623000
GI number: 84623000
Start: 1466111
End: 1467058
Strand: Direct
Name: 84623000
Synonym: XOO_1343
Alternate gene names: NA
Gene position: 1466111-1467058 (Clockwise)
Preceding gene: 84622999
Following gene: 84623001
Centisome position: 29.68
GC content: 56.86
Gene sequence:
>948_bases ATGAGCGAGCTTTCCTTTGCCAACGCGCCCCCTGACGATCAACAGCTAGCGCGGTTGGCCGATACACTGATGTTGCATGA CGTACCCGCCGGGCGGCTTTGGGCACTGATCGATGTTGCCCTGGTCGGAGCCGAGCGGTTCGGCGCTTTCAGAAAACGCA TGAAGTTTCAAACCTACAATGCGTTGGCCGAATCCTCGCTGGTGGCATTTGGTCAGCATGCCCCGCATTTTCTGGAATGC CCGGAAGATCAGGAAGCTCGCCACTACACCATCCGGCAGTTGTACCGTTTTGCCGGAAGTGCAACGGCGGTGAGTTGGTT GTGGAGCGATCAAGCACGCATTGCTTTACAGCGAATGGCTGGTTATTTGGCCAAGGTGCATATAGAAGACAGAAAAGCGC CTGTGCATTGTCGTTTCGCCGATACGCGGGTACTCCCGCACTTGTTGCAGGTGCTGACGCCAACCCAGAGCTTACCCGTA CGCGATGCGGTGTCCGCCTGGCACTGGCTGGGGCGCGAAGCCGATACGGAAGCATGGCATCCGCGCAGCACCGCAGCGGA TGAAGCTAGCCCGGCACCTGCACCCCTGAGGCTATCGATCGGTCAATTCCGTGCGATGCAGGTGGCTGCTGAGCCCGATG TATTGTTCTCGTCGCTGCTCGACAAGACGCCGGAGCTTGTTCCGACTGACGATAGAGGCCAATTTCATCGCGTCATCAAA CAGCACGTGCAGACGGCGAACGCACTTTCGCTCAGCACGCAGCAAGATCGTCTCCAGTTCTTGATCCTCAGCCTTTCTTG CGGAAACGACTTTTATGAAATTCCAGCCCTACAGCCTGTGTGGACATCCATTGCACAGCACAAGATCGGTCTTTGCGATT CGATGCGCTCGTGGGGCGATGTCATCTGGAAGGCCCTTGAAACCCGCAGAGATAAAATCGATGCCTGA
Upstream 100 bases:
>100_bases CGGTCAACTTGGGATATGGCCTACCGCTATTCCCCGAATCTGTGTGCGTCGAATGCATGCTCAAGGCGGCGGCTAACGGC TCCCCGTTTGCGGCACTGCA
Downstream 100 bases:
>100_bases TAGTCACAAGCACCGGCTCCGTTTGCCTGCAGACATCAGGCGCGGCCTGGTGCACCGCACGGTGCTTGGGTTGTCCCGTT TGCTGATGCTGGCAGCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSELSFANAPPDDQQLARLADTLMLHDVPAGRLWALIDVALVGAERFGAFRKRMKFQTYNALAESSLVAFGQHAPHFLEC PEDQEARHYTIRQLYRFAGSATAVSWLWSDQARIALQRMAGYLAKVHIEDRKAPVHCRFADTRVLPHLLQVLTPTQSLPV RDAVSAWHWLGREADTEAWHPRSTAADEASPAPAPLRLSIGQFRAMQVAAEPDVLFSSLLDKTPELVPTDDRGQFHRVIK QHVQTANALSLSTQQDRLQFLILSLSCGNDFYEIPALQPVWTSIAQHKIGLCDSMRSWGDVIWKALETRRDKIDA
Sequences:
>Translated_315_residues MSELSFANAPPDDQQLARLADTLMLHDVPAGRLWALIDVALVGAERFGAFRKRMKFQTYNALAESSLVAFGQHAPHFLEC PEDQEARHYTIRQLYRFAGSATAVSWLWSDQARIALQRMAGYLAKVHIEDRKAPVHCRFADTRVLPHLLQVLTPTQSLPV RDAVSAWHWLGREADTEAWHPRSTAADEASPAPAPLRLSIGQFRAMQVAAEPDVLFSSLLDKTPELVPTDDRGQFHRVIK QHVQTANALSLSTQQDRLQFLILSLSCGNDFYEIPALQPVWTSIAQHKIGLCDSMRSWGDVIWKALETRRDKIDA >Mature_314_residues SELSFANAPPDDQQLARLADTLMLHDVPAGRLWALIDVALVGAERFGAFRKRMKFQTYNALAESSLVAFGQHAPHFLECP EDQEARHYTIRQLYRFAGSATAVSWLWSDQARIALQRMAGYLAKVHIEDRKAPVHCRFADTRVLPHLLQVLTPTQSLPVR DAVSAWHWLGREADTEAWHPRSTAADEASPAPAPLRLSIGQFRAMQVAAEPDVLFSSLLDKTPELVPTDDRGQFHRVIKQ HVQTANALSLSTQQDRLQFLILSLSCGNDFYEIPALQPVWTSIAQHKIGLCDSMRSWGDVIWKALETRRDKIDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35438; Mature: 35306
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELSFANAPPDDQQLARLADTLMLHDVPAGRLWALIDVALVGAERFGAFRKRMKFQTYN CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAESSLVAFGQHAPHFLECPEDQEARHYTIRQLYRFAGSATAVSWLWSDQARIALQRMA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH GYLAKVHIEDRKAPVHCRFADTRVLPHLLQVLTPTQSLPVRDAVSAWHWLGREADTEAWH HHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC PRSTAADEASPAPAPLRLSIGQFRAMQVAAEPDVLFSSLLDKTPELVPTDDRGQFHRVIK CCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QHVQTANALSLSTQQDRLQFLILSLSCGNDFYEIPALQPVWTSIAQHKIGLCDSMRSWGD HHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH VIWKALETRRDKIDA HHHHHHHHHHHHCCC >Mature Secondary Structure SELSFANAPPDDQQLARLADTLMLHDVPAGRLWALIDVALVGAERFGAFRKRMKFQTYN CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAESSLVAFGQHAPHFLECPEDQEARHYTIRQLYRFAGSATAVSWLWSDQARIALQRMA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH GYLAKVHIEDRKAPVHCRFADTRVLPHLLQVLTPTQSLPVRDAVSAWHWLGREADTEAWH HHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC PRSTAADEASPAPAPLRLSIGQFRAMQVAAEPDVLFSSLLDKTPELVPTDDRGQFHRVIK CCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QHVQTANALSLSTQQDRLQFLILSLSCGNDFYEIPALQPVWTSIAQHKIGLCDSMRSWGD HHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH VIWKALETRRDKIDA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA