| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is osmC [H]
Identifier: 84622969
GI number: 84622969
Start: 1432733
End: 1433167
Strand: Direct
Name: osmC [H]
Synonym: XOO_1312
Alternate gene names: 84622969
Gene position: 1432733-1433167 (Clockwise)
Preceding gene: 84622968
Following gene: 84622970
Centisome position: 29.0
GC content: 61.84
Gene sequence:
>435_bases ATGGGTATTTCACGTCACGCCACCGCTCACTGGGAAGGCGACCTCAAGACCGGCAAGGGCCAGCTCAGCACACCGCAGAG CGGCGTGATGGACAACACCCGTTATGCTTTCAGCAGCCGCTTCGGCGACGAGAAGGGCACCAATCCGGAAGAACTCATCG CCGCCGCGCATGCCGGCTGTTTCACCATGGCGTTGTCTGCGCAGCTGACCGAAGCCGGTTTTCCGCCGACCTCGCTGGAT ACGCGCGCCGATGTGGATTTGTCGATGGAAGGCGGCCCGCAGTTGTCGCAGATCCGTCTCAAGCTCAAGGCCGTCGTGCC GGGCATCGACGAAGCCACGTTCCGTGAGTTGGCCGATACCGCCAAGAAAAATTGCCCGGTGTCCAAGGCGCTGAGCGCCG TGCCGATCAGTCTGGAAACCGAGTTTTCCAGCTGA
Upstream 100 bases:
>100_bases TCTGCTCTTGCGATTCCCGATTCCTGATTCCCGATTCCCGCACCACCAGCTAACAGCTACTCACCTATCGTGACCGCTCC TTTCAGCGCAGGAGATCGCA
Downstream 100 bases:
>100_bases GAGCACCACCGCTGCGGCGCGTCGGCACAGGTGCCCGGCGCGTGCAGCTGGCGGAAACCTGAATAGGGCTCTTCGAGGCC GGTTTGGTTCAGGGCGGTTT
Product: osmotically inducible protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGISRHATAHWEGDLKTGKGQLSTPQSGVMDNTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLD TRADVDLSMEGGPQLSQIRLKLKAVVPGIDEATFRELADTAKKNCPVSKALSAVPISLETEFSS
Sequences:
>Translated_144_residues MGISRHATAHWEGDLKTGKGQLSTPQSGVMDNTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLD TRADVDLSMEGGPQLSQIRLKLKAVVPGIDEATFRELADTAKKNCPVSKALSAVPISLETEFSS >Mature_143_residues GISRHATAHWEGDLKTGKGQLSTPQSGVMDNTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLDT RADVDLSMEGGPQLSQIRLKLKAVVPGIDEATFRELADTAKKNCPVSKALSAVPISLETEFSS
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=145, Percent_Identity=53.1034482758621, Blast_Score=147, Evalue=2e-37,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 15284; Mature: 15153
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISRHATAHWEGDLKTGKGQLSTPQSGVMDNTRYAFSSRFGDEKGTNPEELIAAAHAGC CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCH FTMALSAQLTEAGFPPTSLDTRADVDLSMEGGPQLSQIRLKLKAVVPGIDEATFRELADT HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AKKNCPVSKALSAVPISLETEFSS HHHCCCHHHHHHHCCCEEECCCCC >Mature Secondary Structure GISRHATAHWEGDLKTGKGQLSTPQSGVMDNTRYAFSSRFGDEKGTNPEELIAAAHAGC CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCH FTMALSAQLTEAGFPPTSLDTRADVDLSMEGGPQLSQIRLKLKAVVPGIDEATFRELADT HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AKKNCPVSKALSAVPISLETEFSS HHHCCCHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]