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The map label for this gene is ygiC [H]

Identifier: 84622809

GI number: 84622809

Start: 1256050

End: 1257216

Strand: Direct

Name: ygiC [H]

Synonym: XOO_1152

Alternate gene names: 84622809

Gene position: 1256050-1257216 (Clockwise)

Preceding gene: 84622808

Following gene: 84622812

Centisome position: 25.42

GC content: 63.07

Gene sequence:

>1167_bases
ATGCAACGCATCCACATCGCCGAACGCCCGGATTGGCGCACGCAGGCCGAATCGCTGGGTTTCCACTTCCACACCATCGA
TGGCGAACCGTACTGGGACGAAAGCGCGTACTACGCTTTTTCGCTGCGGCAGATCGAAGACGACATCGAAGCGCCCACGC
AAGACCTGCACGACATGGCGATGCAACTGGTGGACGAGGTGGTGCGCTCCGAAGCGCTGATGACGCAGCTGGCGATCCCG
CCGTTCTACTGGGACTGGATCGCCAACTCGTGGAAAGAGCGCGACCCGCATCTGTATGGCCGCATGGACCTGGCGTATTC
GGGCGACGGCCCGGCCAAGTTGTACGAACTCAATTACGACACCCCGACCGCGCTGTACGAGTCGGCGTATTTCCAATGGT
TGTGGCTGGAACAGCAGATCGCCAGCGGCGCGCTGCCCAAGGGCACCGATCAGTACAACCTGATCCAGGATCTGCTGTGC
GAAACCCTAGGTGCGCTGGCGGTGGACGGCGCGATCGGTGCGCAGATGCATTTTGCGGCGGTACGCGACTCGCTGGAAGA
TCGCGCCACCGTGCGGTACCTGCGCGACTGTGCGCATCAGGTCGGCATCAGTACCGAGGAAGTGGCGATCGAAGACATCG
GCCTGAGCGCGGAAGGCTGGTTCACAGATGAGCAGGATCGGGTGATCCATACGCTGTTCAAGCTGTATCCGCTGGAATTC
ATGATGGAAGAGCGCTTCGGGCCGGCATTGATTGCCGACCGGATGCGCCTGATCGAGCCGGCATGGAAATCGGTGTTGAG
CAACAAAGGCATTCTGCCGCTGCTATGGGACCGCCATCAGGGTCACCCGAATCTGCTGCCCGCCCGCTTTGCGCAAGCCG
GCGAGTTGCCCACTGCAGGCTGGGTCCGCAAGCCATTGCTGTCGCGCGAGGGCGCCAACATCGCGCTGGTCACAGCCCAA
GGCCAGACCGCACACACCGACGGCCCGTATGTGGATGGCCCTGCGATTCTGCAGGCGCATCACCCGCTGCCGGTGTTCGA
CGCACGCCATGCGCTGGTGGGCAGCTGGGTGGTTGCCGATCGCCCCGCTGGATTGGGCATGCGCGACGACGATGGCCCGA
TCACCCGCGACACCTCGCGCTTCGTGCCGCACGTCATCACCGATTGA

Upstream 100 bases:

>100_bases
ACGCGCGCCATCACGGTGTCGCGATCGGGCTTCGGGTCCAGCGCGGCAGCACGCAGTTCATTCGGCAGCGGCGGGCGCAG
CTCGGGCTTCGGCAGCTGAC

Downstream 100 bases:

>100_bases
CGCCTAGCTGAGGGTGCATCGCCGCTGCGCTGGCGCTGTCCATCGCGCTTGACACAAGCGCCAGCTGGGCGCAAGGCCTT
GTGTGCATGCAAGGCATCCC

Product: synthetase/amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQRIHIAERPDWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQDLHDMAMQLVDEVVRSEALMTQLAIP
PFYWDWIANSWKERDPHLYGRMDLAYSGDGPAKLYELNYDTPTALYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRMRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGELPTAGWVRKPLLSREGANIALVTAQ
GQTAHTDGPYVDGPAILQAHHPLPVFDARHALVGSWVVADRPAGLGMRDDDGPITRDTSRFVPHVITD

Sequences:

>Translated_388_residues
MQRIHIAERPDWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQDLHDMAMQLVDEVVRSEALMTQLAIP
PFYWDWIANSWKERDPHLYGRMDLAYSGDGPAKLYELNYDTPTALYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRMRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGELPTAGWVRKPLLSREGANIALVTAQ
GQTAHTDGPYVDGPAILQAHHPLPVFDARHALVGSWVVADRPAGLGMRDDDGPITRDTSRFVPHVITD
>Mature_388_residues
MQRIHIAERPDWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQDLHDMAMQLVDEVVRSEALMTQLAIP
PFYWDWIANSWKERDPHLYGRMDLAYSGDGPAKLYELNYDTPTALYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLC
ETLGALAVDGAIGAQMHFAAVRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
MMEERFGPALIADRMRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGELPTAGWVRKPLLSREGANIALVTAQ
GQTAHTDGPYVDGPAILQAHHPLPVFDARHALVGSWVVADRPAGLGMRDDDGPITRDTSRFVPHVITD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=389, Percent_Identity=47.5578406169666, Blast_Score=386, Evalue=1e-108,
Organism=Escherichia coli, GI1790629, Length=389, Percent_Identity=50.6426735218509, Blast_Score=386, Evalue=1e-108,
Organism=Escherichia coli, GI1789361, Length=390, Percent_Identity=24.3589743589744, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 43830; Mature: 43830

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIHIAERPDWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQDLHDMA
CCCEECCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHH
MQLVDEVVRSEALMTQLAIPPFYWDWIANSWKERDPHLYGRMDLAYSGDGPAKLYELNYD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCEEEEEEEEECCCCCEEEEEECCC
TPTALYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLCETLGALAVDGAIGAQMHFAA
CHHHHHHHHHHHEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MMEERFGPALIADRMRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGELPTAG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCH
WVRKPLLSREGANIALVTAQGQTAHTDGPYVDGPAILQAHHPLPVFDARHALVGSWVVAD
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHCEEEEC
RPAGLGMRDDDGPITRDTSRFVPHVITD
CCCCCCCCCCCCCCCCCHHHCCCHHCCC
>Mature Secondary Structure
MQRIHIAERPDWRTQAESLGFHFHTIDGEPYWDESAYYAFSLRQIEDDIEAPTQDLHDMA
CCCEECCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHH
MQLVDEVVRSEALMTQLAIPPFYWDWIANSWKERDPHLYGRMDLAYSGDGPAKLYELNYD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCEEEEEEEEECCCCCEEEEEECCC
TPTALYESAYFQWLWLEQQIASGALPKGTDQYNLIQDLLCETLGALAVDGAIGAQMHFAA
CHHHHHHHHHHHEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VRDSLEDRATVRYLRDCAHQVGISTEEVAIEDIGLSAEGWFTDEQDRVIHTLFKLYPLEF
HHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MMEERFGPALIADRMRLIEPAWKSVLSNKGILPLLWDRHQGHPNLLPARFAQAGELPTAG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCH
WVRKPLLSREGANIALVTAQGQTAHTDGPYVDGPAILQAHHPLPVFDARHALVGSWVVAD
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHCEEEEC
RPAGLGMRDDDGPITRDTSRFVPHVITD
CCCCCCCCCCCCCCCCCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]