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The map label for this gene is ygiB [C]

Identifier: 84622808

GI number: 84622808

Start: 1255476

End: 1256048

Strand: Direct

Name: ygiB [C]

Synonym: XOO_1151

Alternate gene names: 84622808

Gene position: 1255476-1256048 (Clockwise)

Preceding gene: 84622807

Following gene: 84622809

Centisome position: 25.41

GC content: 65.1

Gene sequence:

>573_bases
ATGAAGCGATCACGCAATCTCAAACTCACCTTGATGGCCGCGCTGCCGGCCGCTTTCGTCACCGGCTGCGGCTCGGAGCC
GGAGACCGGTGTGGTGCTGCAGTCGGCCTCGGACTGTTACCAGATCAAGAAGGAACAGACCGACATCCAGCAATGCCTCA
AGGCCTACGACGAGGCGGTGGCCAAGCATCAGCAGGCCGCGCCGCGCTTCACTACGCGCTACGAGTGCGATGCGCAGTTC
GGTAGTTGCACGGCGATCACCACTCCGCAAGGCCAGCAGAGCTGGATTCCGCCGATGGGCGGGTTCTTGCTGGGCTACGC
GTTGGGCCACATGAGCGGCGGCGGTTATCACTATGGCGGCGCGATTCCGCTGTATCGCGACTATCGCAGCGGTGGTTACT
ACAAGCCCAATGGCGATCTGGCCAGCGACCGCATTGGTACCGTGCGTGGGCGCAGCGGCGCCATCGACATGCCCACGCGC
GCCATCACGGTGTCGCGATCGGGCTTCGGGTCCAGCGCGGCAGCACGCAGTTCATTCGGCAGCGGCGGGCGCAGCTCGGG
CTTCGGCAGCTGA

Upstream 100 bases:

>100_bases
CACCGACAACATGACCGCCGCCGGTCTCTTTTCGGCCGGCGTGTCGATCGCAGTCGGGCTGATCAACGCCGCCGCGATCA
CGCCGTAACGGAGCGCAGGC

Downstream 100 bases:

>100_bases
CATGCAACGCATCCACATCGCCGAACGCCCGGATTGGCGCACGCAGGCCGAATCGCTGGGTTTCCACTTCCACACCATCG
ATGGCGAACCGTACTGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKKEQTDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITTPQGQQSWIPPMGGFLLGYALGHMSGGGYHYGGAIPLYRDYRSGGYYKPNGDLASDRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGS

Sequences:

>Translated_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKKEQTDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITTPQGQQSWIPPMGGFLLGYALGHMSGGGYHYGGAIPLYRDYRSGGYYKPNGDLASDRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGS
>Mature_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKKEQTDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITTPQGQQSWIPPMGGFLLGYALGHMSGGGYHYGGAIPLYRDYRSGGYYKPNGDLASDRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGS

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693179, Length=211, Percent_Identity=28.436018957346, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20117; Mature: 20117

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKKEQTDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDAQFGSCTAITTPQGQQSWIPPMGGFLLGYALGHMSGGGYHYGG
HHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCC
AIPLYRDYRSGGYYKPNGDLASDRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCC
SGGRSSGFGS
CCCCCCCCCC
>Mature Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKKEQTDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDAQFGSCTAITTPQGQQSWIPPMGGFLLGYALGHMSGGGYHYGG
HHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCC
AIPLYRDYRSGGYYKPNGDLASDRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCC
SGGRSSGFGS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA