| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622725
Identifier: 84622725
GI number: 84622725
Start: 1163395
End: 1165152
Strand: Direct
Name: 84622725
Synonym: XOO_1068
Alternate gene names: NA
Gene position: 1163395-1165152 (Clockwise)
Preceding gene: 84622724
Following gene: 84622726
Centisome position: 23.55
GC content: 67.12
Gene sequence:
>1758_bases ATGATCGGCAGACACCATTTGCGTCGCGCGGCGATCGGCATGCTGGCCAGCCTGGCACTGTTGGTGTGCGCACCGGCGGG TGCGGTCACGCGCGCGTGGCTGGATCGCGACAGCGTCAATGTCGGCGATGTGGCGATGTTGAATATCGAAACCGACCAAC GCGGCGTCGACCCGGATTACACACCACTGCGCAGCGATTTTTCGCTAGGCGCCAAGAGCGCCAATCAGCAGATGCAGGTG ACCAATGGTTCGGTGACGGTACGTGCCTTGTTTGGCGTGGTGCTGGCACCGCGCAAGAGTGGTGAACTGATCGTACCGGC GATCCGCGTGGGCAACGAGCGCACCGAGCCGCTGCGTTTGCAGGTGGTTGGGGCGGCGAACGATCCCTCCGGCAGTTCGG GCAGGGCTGCCGACGCGCCGAATGCGGCGCAGGGCAATGAAGAGGCCTTCGTCGAAACCCGGGTAGACGATCCACAGCCC TACGTGCAGCAAAGCGTGGGCGTGGTGGTGCGGTTGTACTTCGCCAACCAACTGGCATCGGGCGAGCTGGATCTTGAGGC GCCCGATGGTGCCTCGATGCAGCGCGTCGGCGATGACGTCAGCTCGGTCAAGGTGCTCAATGGACGCCAGTACAACGTGG TGGAGCGGCGCTATCTGCTGGTGCCCGAGCGCAGCGGCCGTCTGCTGCTGCCACCGGCACGCTTCAACGGGCGTTCGGTC GGTGGATTTTTCGACGACTACTTCGGGCGAGGCAACGGTGAGCTGAGTGCGCGCAGTGCCAGCATTCCGTTGCAGGTGCG TGCGCAACCGGCCAACGCACCGCAGCCATGGCTGCCGTTGCGCAGCCTGCAGTTGCGCTACACGACCACGCCACAGCGGG CGACCGCCGGTGAGGCCGCGCAATTGGTCGTGGAAGCCACTGCGCGCGGCGCCACCCAGGCGCAGTTTCCCGAATTGCCG ACCCCCAGCGTGCCCGACGCGCAGGTGTTCGCCGAGCCGCCGCAGTTCGAAGAAGGCTTCGTGGACGGCTCGCCGCAGCT GCGATTGACCAGACGCTATTCGATCGTGCCCAACCGCGCCGGTCCCTTGGTGGTGCCTGGGTTGCAGGTGGCATGGTGGG ACGTGGCCGCAGGCGCAGCCAAGACTGCGTCACTGCCGGATCTGACGCTGAATGTTGCGGCAGGCAGCGGCGCGTTTGCG ACACCTGCGCCGTCACCGGCTGCGAACCCGGCGCCCGATCGATCGGCGCCGACGACGGATCGCACGTTCGCCCTGCAACC ACCATCGCCCGCGCGACCGCCATGGGGCTGGATCGTGGCCGCGGTCGGGTTTGCGTTCTTGTGGATCGCCACGCTGGTGT GGGCGTTGCTACGTCGGCGTGGTACTTCGAGCAGTAGATCACGCCGTAATGACAGTAATGGCAGCGCTGTGCCCGCTGCT GGCAGACGCGCAACCCATGGCGTGGCCGAGTTGCGCCGCGCGCTCGATACCGGCGGCATGGACGATGTGGCGGCGGTGCT CTGCGGCATGGCCGGAGTTGCCGATATCGACGCAGTGTTGGCGGCATTGGCAGACCCGGCGCAGCGGGCAGCCGTGGCGC GGATGCAACGCGCGCGCTGGGGTGGCGACGGCGATGTGGCCGGCGCGTGCGCCGCCTTGCGCGAGGCGTTCGCCAAGGGA CCACGCTGGCAGCATGCGAGCGCGGCCGAACCAGAGGTGCTTGCGCCGTTGTATCCGCCTGCGCCTAAGAGCGGCTAA
Upstream 100 bases:
>100_bases AGGCGGTGGATGCATGGCTGCGGCGGGTGCCGGACGATCCGGGCAGCCTGCTGCGCACCAAATTCAGGCTTGAATACGAA CGCAGGCAACGGGACGGACG
Downstream 100 bases:
>100_bases CACCACCACTGCGCAGCCGCCAGGCGGGCGCGGCCGGTGCTCGGAATCGGCATGTACTTACTCGTGCACTCCGGTTCTGA GCGCGCCCTCCGCGCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MIGRHHLRRAAIGMLASLALLVCAPAGAVTRAWLDRDSVNVGDVAMLNIETDQRGVDPDYTPLRSDFSLGAKSANQQMQV TNGSVTVRALFGVVLAPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPSGSSGRAADAPNAAQGNEEAFVETRVDDPQP YVQQSVGVVVRLYFANQLASGELDLEAPDGASMQRVGDDVSSVKVLNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQLVVEATARGATQAQFPELP TPSVPDAQVFAEPPQFEEGFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQVAWWDVAAGAAKTASLPDLTLNVAAGSGAFA TPAPSPAANPAPDRSAPTTDRTFALQPPSPARPPWGWIVAAVGFAFLWIATLVWALLRRRGTSSSRSRRNDSNGSAVPAA GRRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVLAALADPAQRAAVARMQRARWGGDGDVAGACAALREAFAKG PRWQHASAAEPEVLAPLYPPAPKSG
Sequences:
>Translated_585_residues MIGRHHLRRAAIGMLASLALLVCAPAGAVTRAWLDRDSVNVGDVAMLNIETDQRGVDPDYTPLRSDFSLGAKSANQQMQV TNGSVTVRALFGVVLAPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPSGSSGRAADAPNAAQGNEEAFVETRVDDPQP YVQQSVGVVVRLYFANQLASGELDLEAPDGASMQRVGDDVSSVKVLNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQLVVEATARGATQAQFPELP TPSVPDAQVFAEPPQFEEGFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQVAWWDVAAGAAKTASLPDLTLNVAAGSGAFA TPAPSPAANPAPDRSAPTTDRTFALQPPSPARPPWGWIVAAVGFAFLWIATLVWALLRRRGTSSSRSRRNDSNGSAVPAA GRRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVLAALADPAQRAAVARMQRARWGGDGDVAGACAALREAFAKG PRWQHASAAEPEVLAPLYPPAPKSG >Mature_585_residues MIGRHHLRRAAIGMLASLALLVCAPAGAVTRAWLDRDSVNVGDVAMLNIETDQRGVDPDYTPLRSDFSLGAKSANQQMQV TNGSVTVRALFGVVLAPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPSGSSGRAADAPNAAQGNEEAFVETRVDDPQP YVQQSVGVVVRLYFANQLASGELDLEAPDGASMQRVGDDVSSVKVLNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQLVVEATARGATQAQFPELP TPSVPDAQVFAEPPQFEEGFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQVAWWDVAAGAAKTASLPDLTLNVAAGSGAFA TPAPSPAANPAPDRSAPTTDRTFALQPPSPARPPWGWIVAAVGFAFLWIATLVWALLRRRGTSSSRSRRNDSNGSAVPAA GRRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVLAALADPAQRAAVARMQRARWGGDGDVAGACAALREAFAKG PRWQHASAAEPEVLAPLYPPAPKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61721; Mature: 61721
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRHHLRRAAIGMLASLALLVCAPAGAVTRAWLDRDSVNVGDVAMLNIETDQRGVDPDY CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC TPLRSDFSLGAKSANQQMQVTNGSVTVRALFGVVLAPRKSGELIVPAIRVGNERTEPLRL CCCCCCHHCCCCCCCCEEEEECCCEEHEEHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE QVVGAANDPSGSSGRAADAPNAAQGNEEAFVETRVDDPQPYVQQSVGVVVRLYFANQLAS EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEHHHHHCC GELDLEAPDGASMQRVGDDVSSVKVLNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV CCEEEECCCCCCHHHHCCCHHHEEEECCCEEEEEEEEEEEEECCCCCEEECCCCCCCCCC GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAA CCHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH QLVVEATARGATQAQFPELPTPSVPDAQVFAEPPQFEEGFVDGSPQLRLTRRYSIVPNRA HHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC GPLVVPGLQVAWWDVAAGAAKTASLPDLTLNVAAGSGAFATPAPSPAANPAPDRSAPTTD CCEEECCCEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC RTFALQPPSPARPPWGWIVAAVGFAFLWIATLVWALLRRRGTSSSRSRRNDSNGSAVPAA CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC GRRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVLAALADPAQRAAVARMQRARW CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GGDGDVAGACAALREAFAKGPRWQHASAAEPEVLAPLYPPAPKSG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MIGRHHLRRAAIGMLASLALLVCAPAGAVTRAWLDRDSVNVGDVAMLNIETDQRGVDPDY CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC TPLRSDFSLGAKSANQQMQVTNGSVTVRALFGVVLAPRKSGELIVPAIRVGNERTEPLRL CCCCCCHHCCCCCCCCEEEEECCCEEHEEHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE QVVGAANDPSGSSGRAADAPNAAQGNEEAFVETRVDDPQPYVQQSVGVVVRLYFANQLAS EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEHHHHHCC GELDLEAPDGASMQRVGDDVSSVKVLNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV CCEEEECCCCCCHHHHCCCHHHEEEECCCEEEEEEEEEEEEECCCCCEEECCCCCCCCCC GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAA CCHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH QLVVEATARGATQAQFPELPTPSVPDAQVFAEPPQFEEGFVDGSPQLRLTRRYSIVPNRA HHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC GPLVVPGLQVAWWDVAAGAAKTASLPDLTLNVAAGSGAFATPAPSPAANPAPDRSAPTTD CCEEECCCEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC RTFALQPPSPARPPWGWIVAAVGFAFLWIATLVWALLRRRGTSSSRSRRNDSNGSAVPAA CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC GRRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVLAALADPAQRAAVARMQRARW CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC GGDGDVAGACAALREAFAKGPRWQHASAAEPEVLAPLYPPAPKSG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA